RetrogeneDB ID: | retro_etel_1673 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_286818:49872..50238(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 63.49 % |
Parental protein coverage: | 92.48 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | SRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKAKSIVFHRKKNLQYYDISAKSNY-NFEKP-F |
SR.TYKNVPN.H.DL...CENI.I.LCG.KVDIKDRK.K.KSIVFH.KKN.QYY.I.AKS....F..P.F | |
Retrocopy | SRITYKNVPNLHKDLI*LCENISIMLCGSKVDIKDRKIKTKSIVFH*KKNHQYYAIFAKSLH<PFKSP<F |
Parental | LWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDL-EVAQTTALPDEDDDL |
..L.R..I.DP.LE.V.MP.LAPPEV..DPALAAQYE..L..VA..T......DDL | |
Retrocopy | FCLVRERIKDPKLELVTMPVLAPPEVITDPALAAQYENGL<IVAHITTRWGKHDDL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |