RetrogeneDB ID: | retro_etel_1161 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_21983:3250..3646(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSETEG00000017953 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSETEG00000011875 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 86.57 % |
Parental protein coverage: | 99.25 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | QCAIIMFDVTSRVTYKNVPNWHRDLVRVCENIPIVLCGNKVDIKDRKVKA-KSIVFHRKK-NLQYYDISA |
QCAIIMFDVTSR.TYKNVPNWHRDLVRVCENIPIVLCGNKV.IK.R.VKA.KSIVFHRK...L.YYDISA | |
Retrocopy | QCAIIMFDVTSRFTYKNVPNWHRDLVRVCENIPIVLCGNKVGIKGREVKA>KSIVFHRKR<DLLYYDISA |
Parental | KSNYNFEKPFLWLARKLIGDPNLEFVAMPALAPPEVVMDPALAAQYEHDLEVAQTTALPDEDDD |
KS.Y.FEKPFL.LARKLIGDPNLEFVAMPA.APPEV..DPALAAQ.EHDLE.AQTTAL.DEDDD | |
Retrocopy | KSHYHFEKPFL*LARKLIGDPNLEFVAMPAAAPPEVARDPALAAQDEHDLEAAQTTALRDEDDD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |