Parental gene:

RPL23A, ENSBTAG00000046394

Aliases:RPL23A, RPL23AY
Description:60S ribosomal protein L23a [Source:UniProtKB/Swiss-Prot;Acc:Q24JY1]
Organism:Cow (Bos taurus)
Coordinates:19:20703987..20706890(+)


>ENSBTAG00000046394
ATGGCGCCGAAGGCGAAGAAGGAAGCCCCTGCTCCTCCTAAAGCTGAAGCCAAAGCAAAGGCTTTGAAGGCCAAGAAAGC
AGTGTTGAAAGGTGTCCACAGCCACAAAAAAAAGAAGATCCGGACGTCGCCCACCTTCCGGCGGCCCAAAACACTGCGGC
TCAGGAGGCAGCCCAAATACCCTCGGAAGAGCGCGCCTAGGAGAAACAAACTTGACCACTATGCCATCATCAAATTCCCC
CTCACCACCGAGTCAGCCATGAAGAAAATAGAAGACAACAACACACTGGTATTCATTGTGGACGTCAAGGCCAACAAGCA
CCAAATTAAACAGGCTGTGAAGAAGCTCTATGACATTGACGTGGCTAAGGTCAATACTCTGATCAGGCCTGATGGAGAGA
AGAAGGCATATGTTCGACTGGCTCCTGACTATGATGCTTTGGATGTTGCCAACAAAATTGGCATCATCTAA

Library Parental gene expression (RPM)
SRP017611_brain 79 .66 RPM
SRP017611_kidney 164 .54 RPM
SRP017611_liver 107 .15 RPM
ERP005899_muscle 700 .04 RPM
ERP005899_liver 140 .95 RPM
SRP030211_testis 54 .99 RPM



Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000005311 possible_ortholog 2 retrogenes
Callithrix jacchus ENSCJAG00000013126 possible_ortholog 7 retrogenes
Dasypus novemcinctus ENSDNOG00000019487 possible_ortholog 65 retrogenes
Felis catus ENSFCAG00000004021 possible_ortholog 35 retrogenes
Homo sapiens ENSG00000198242 possible_ortholog 57 retrogenes
Gorilla gorilla ENSGGOG00000016736 possible_ortholog 26 retrogenes
Loxodonta africana ENSLAFG00000013387 possible_ortholog 16 retrogenes
Myotis lucifugus ENSMLUG00000012448 possible_ortholog 4 retrogenes
Monodelphis domestica ENSMODG00000019297 possible_ortholog 3 retrogenes
Mustela putorius furo ENSMPUG00000014179 possible_ortholog 12 retrogenes
Mus musculus ENSMUSG00000058546 possible_ortholog 8 retrogenes
Nomascus leucogenys ENSNLEG00000002872 possible_ortholog 60 retrogenes
Procavia capensis ENSPCAG00000017002 possible_ortholog 30 retrogenes
Pongo abelii ENSPPYG00000008108 possible_ortholog 49 retrogenes
Pteropus vampyrus ENSPVAG00000002922 possible_ortholog 32 retrogenes
Rattus norvegicus ENSRNOG00000023344 possible_ortholog 6 retrogenes
Sarcophilus harrisii ENSSHAG00000014549 possible_ortholog 13 retrogenes
Sus scrofa ENSSSCG00000017768 possible_ortholog 9 retrogenes
Sus scrofa ENSSSCG00000029802 possible_ortholog 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000011328 ortholog_one2many 23 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_8 99.36 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_btau_132 98.72 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_btau_159 98.08 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_btau_169 95.51 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_btau_178 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_btau_237 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSBTAG00000046394 retrocopies