Parental gene: | PFDN5, ENSCAFG00000007016 |
| Aliases: | None |
| Description: | Canis lupus familiaris prefoldin subunit 5 (PFDN5), mRNA. [Source:RefSeq mRNA;Acc:NM_001251949] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | 27:1906132..1909613(-) |
>ENSCAFG00000007016
ATGGCGCAGTCGGTTAACATCACGGAGCTGAACCTGCCGCAGCTAGAGATGCTCAAGAACCAGCTGGACCAGGAAGTGGA
GTTCCTGTCCACGTCCATCGCGCAGCTCAAGGTGGTGCAGACCAAGTACGTGGAAGCCAAGGACTGTCTGCACGTGCTCA
ACAAGAACAACGAGGGGAAAGAACTACTCGTCCCACTGACGAGCTCTATGTATGTCCCTGGGAAGCTACATGATGTGGAA
CATGTGCTCATCGATGTGGGAACAGGCTACTATGTAGAAAAGACAGCGGAGGATGCCAAGGACTTTTTCAAGAGGAAGAT
AGACTTTCTTACGAAGCAAATGGAGAAAATCCAACCAGCTCTGCAGGAGAAGCATGCCATGAAACAGGCTGTCATGGAGA
TGATGAGCCAGAAGATTCAGCAGCTCACAGCCCTGGGGGCAACTCAGGCGACGGCCAAGGCCTGA
ATGGCGCAGTCGGTTAACATCACGGAGCTGAACCTGCCGCAGCTAGAGATGCTCAAGAACCAGCTGGACCAGGAAGTGGA
GTTCCTGTCCACGTCCATCGCGCAGCTCAAGGTGGTGCAGACCAAGTACGTGGAAGCCAAGGACTGTCTGCACGTGCTCA
ACAAGAACAACGAGGGGAAAGAACTACTCGTCCCACTGACGAGCTCTATGTATGTCCCTGGGAAGCTACATGATGTGGAA
CATGTGCTCATCGATGTGGGAACAGGCTACTATGTAGAAAAGACAGCGGAGGATGCCAAGGACTTTTTCAAGAGGAAGAT
AGACTTTCTTACGAAGCAAATGGAGAAAATCCAACCAGCTCTGCAGGAGAAGCATGCCATGAAACAGGCTGTCATGGAGA
TGATGAGCCAGAAGATTCAGCAGCTCACAGCCCTGGGGGCAACTCAGGCGACGGCCAAGGCCTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 31 .60 RPM |
| SRP017611_kidney | 123 .42 RPM |
| SRP017611_liver | 45 .10 RPM |
| SRP012049_cerebellum | 63 .38 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000012402 | ortholog_one2many | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000018477 | ortholog_many2many | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013002 | ortholog_one2many | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002111 | ortholog_one2many | 3 retrogenes | |
| Felis catus | ENSFCAG00000005871 | ortholog_one2many | 4 retrogenes | |
| Homo sapiens | ENSG00000123349 | ortholog_one2many | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000026308 | ortholog_one2many | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000012110 | ortholog_one2many | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000022030 | ortholog_one2many | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000006059 | ortholog_many2many | 1 retrogene | |
| Mus musculus | ENSMUSG00000001289 | ortholog_one2many | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000017706 | ortholog_one2many | 3 retrogenes | |
| Otolemur garnettii | ENSOGAG00000009463 | ortholog_many2many | 2 retrogenes | |
| Ochotona princeps | ENSOPRG00000015638 | ortholog_one2many | 1 retrogene | |
| Procavia capensis | ENSPCAG00000012413 | ortholog_one2many | 2 retrogenes | |
| Pongo abelii | ENSPPYG00000004575 | ortholog_one2many | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000005010 | ortholog_one2many | 1 retrogene | |
| Sorex araneus | ENSSARG00000006221 | ortholog_one2many | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000016436 | ortholog_one2many | 4 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_919 | 93.80 | 83.77 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_cfam_1382 | 98.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_cfam_1421 | 79.17 | 62.34 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_cfam_1639 | 68.61 | 88.31 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000007016 retrocopies