RetrogeneDB ID: | retro_tbel_3132 | ||
Retrocopylocation | Organism: | Treeshrew (Tupaia belangeri) | |
Coordinates: | scaffold_131097:40366..40777(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSTBEG00000016436 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 58.99 % |
Parental protein coverage: | 90.26 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | AQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSMY |
AQSINI.ELNLPQLE.LKNQLDQ.VEF.S.S.AQLKV.QTK..EAKD.LNV..KS..G.E.LVPLTSS.Y | |
Retrocopy | AQSINISELNLPQLETLKNQLDQGVEFSSMSTAQLKVGQTKDTEAKDYLNVPSKSKKGQEFLVPLTSSVY |
Parental | VPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQ |
V.G.....EH.LI..G.G.YV.K.AED.K.FF.RK.D...K.....Q..L....A.....MEM.S.K.. | |
Retrocopy | VTGNSQGEEHMLITAGIGHYVKKMAEDGKAFFRRKTDSRSKWRKSSQ--LWTRRALRIGTMEMTSGKTE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |