RetrogeneDB ID: | retro_ogar_1820 | ||
Retrocopylocation | Organism: | Bushbaby (Otolemur garnettii) | |
Coordinates: | GL873568.1:3858437..3858898(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSOGAG00000030791 | |
Aliases: | None | ||
Status: | KNOWN_PSEUDOGENE | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSOGAG00000009463 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 83.87 % |
Parental protein coverage: | 99.35 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MAQSINITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKSNEGKELLVPLTSSM |
M.Q.INITE.NLPQL..L.NQLDQEVEFL.TSIAQLKV.QTKY.EAKDCLN.LNKS..GKELLVPLTSSM | |
Retrocopy | MVQLINITERNLPQLKILTNQLDQEVEFLYTSIAQLKVIQTKYMEAKDCLNMLNKSDKGKELLVPLTSSM |
Parental | YVPGKLHDVEHVLIDVGTGYYVEKTAEDAKDFFKRKI-DFLTKQMEKIQPALQEKHA-MKQAVMEMMSQK |
.VPGKLHDVEH.LIDV.TGYYVEKTAED.KDFFKRKI..FLTK.M.KIQPALQEKH...KQA.MEMMSQK | |
Retrocopy | HVPGKLHDVEHMLIDVATGYYVEKTAEDTKDFFKRKI>NFLTK*MKKIQPALQEKHS>TKQAIMEMMSQK |
Parental | IQQLTALGAAQTTAK |
.QQLTALGAAQTTAK | |
Retrocopy | TQQLTALGAAQTTAK |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |