Parental gene:

PFDN5, ENSPTRG00000005010

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:12:35963054..35967226(-)


>ENSPTRG00000005010
ATGGCGCAGTCTATTAACATCACGGAGCTGAATCTGCCGCAGCTAGAAATGCTCAAGAACCAGCTGGACCAGGAAGTGGA
GTTCTTGTCCACGTCCATTGCTCAGCTCAAAGTGGTACAGACTAAGTATGTGGAAGCCAAGGACTGTCTGAACGTGCTGA
ACAAGAGCAACGAGGGGAAAGAATTACTCGTCCCACTGACGAGTTCTATGTATGTCCCTGGGAAGCTGCATGATGTGGAA
CACGTGCTCATCGATGTGGGAACTGGGTACTATGTAGAGAAGACAGCTGAGGATGCCAAGGACTTCTTCAAGAGGAAGAT
AGATTTTCTAACCAAGCAGATGGAGAAAATCCAACCAGCTCTTCAGGAGAAGCACGCCATGAAACAGGCCGTCATGGAAA
TGATGAGTCAGAAGATTCAGCAGCTCACAGCCCTGGGGGCAGCTCAGGCTACTGCTAAGGCCTGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 96 .70 RPM
SRP007412_cerebellum 65 .78 RPM
SRP007412_heart 57 .71 RPM
SRP007412_kidney 143 .81 RPM
SRP007412_liver 56 .53 RPM
SRP007412_testis 107 .49 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000012402 ortholog_one2one 2 retrogenes
Canis familiaris ENSCAFG00000007016 ortholog_one2many 4 retrogenes
Callithrix jacchus ENSCJAG00000018477 ortholog_one2many 6 retrogenes
Dasypus novemcinctus ENSDNOG00000013002 ortholog_one2one 1 retrogene
Echinops telfairi ENSETEG00000002111 ortholog_one2one 3 retrogenes
Felis catus ENSFCAG00000005871 ortholog_one2one 4 retrogenes
Homo sapiens ENSG00000123349 ortholog_one2one 1 retrogene
Gorilla gorilla ENSGGOG00000026308 ortholog_one2one 1 retrogene
Macropus eugenii ENSMEUG00000012110 ortholog_one2one 1 retrogene
Macaca mulatta ENSMMUG00000022030 ortholog_one2one 2 retrogenes
Mustela putorius furo ENSMPUG00000006059 ortholog_one2many 1 retrogene
Mus musculus ENSMUSG00000001289 ortholog_one2one 1 retrogene
Nomascus leucogenys ENSNLEG00000017706 ortholog_one2one 3 retrogenes
Otolemur garnettii ENSOGAG00000009463 ortholog_one2many 2 retrogenes
Ochotona princeps ENSOPRG00000015638 ortholog_one2one 1 retrogene
Procavia capensis ENSPCAG00000012413 ortholog_one2one 2 retrogenes
Pongo abelii ENSPPYG00000004575 ortholog_one2one 1 retrogene
Sorex araneus ENSSARG00000006221 ortholog_one2one 1 retrogene
Tupaia belangeri ENSTBEG00000016436 ortholog_one2one 4 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_384 82.76 93.51
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Download FASTA sequences of all ENSPTRG00000005010 retrocopies