RetrogeneDB ID: | retro_sara_439 | ||
Retrocopylocation | Organism: | Shrew (Sorex araneus) | |
Coordinates: | scaffold_208012:3425..3762(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSSARG00000006221 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 88.6 % |
Parental protein coverage: | 73.38 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | LDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLTKSNEG-KELLVPLTSSMYVPGKLHDVEHVLIDVGTGY |
LD.EVEFLST..A.LKVVQTKYVEAKDCLNV..K...G.KELLVPLTSSMYVPGKLHDVEHVLIDVGTGY | |
Retrocopy | LD*EVEFLSTFTAYLKVVQTKYVEAKDCLNV-GKEQRG>KELLVPLTSSMYVPGKLHDVEHVLIDVGTGY |
Parental | YVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEM |
YVEKT.EDAKDFFKRKIDFLTKQMEKIQ.ALQEKHAMKQAVME. | |
Retrocopy | YVEKTVEDAKDFFKRKIDFLTKQMEKIQLALQEKHAMKQAVMEI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |