RetrogeneDB ID: | retro_etel_1815 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_301489:6859..7186(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSETEG00000002111 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 86.24 % |
Parental protein coverage: | 84.5 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | QLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNRTNEGKELLVPLTSSMYVPGKLHDVDHVLIDVGTGY |
QLDQEVEFLSTSI.QLKVVQTK.VEAKDCLNVL..TNEGKE..VPLTSSMYVPGKLHDVDHVLIDVG.GY | |
Retrocopy | QLDQEVEFLSTSITQLKVVQTKFVEAKDCLNVLHQTNEGKESRVPLTSSMYVPGKLHDVDHVLIDVGMGY |
Parental | YVEKTAENAKDFFKRKIDFLTKQMEKIQPALQEKHAVKQ |
YVEK.A..AKD.F.RKI.F.TKQMEKIQPALQEKHAV.Q | |
Retrocopy | YVEKAAKDAKDSFNRKINFRTKQMEKIQPALQEKHAVIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |