RetrogeneDB ID: | retro_amel_99 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193006.1:14788..15247(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSAMEG00000019708 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | PFDN5 | ||
Ensembl ID: | ENSAMEG00000012402 | ||
Aliases: | None | ||
Description: | prefoldin subunit 5 [Source:HGNC Symbol;Acc:8869] |
Percent Identity: | 81.46 % |
Parental protein coverage: | 94.38 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | SVNITELNLPQLEMLKNQLDQEVEFLSTSIAQLKVVQTKYVEAKDCLNVLNKNNEGKELLVPLTSSMYVP |
SVNITELN..QLE.LKNQLDQEV.F.STSI.Q..VVQTKYVEAK.CLN.LNK.N.GKEL..PLTSS.YV. | |
Retrocopy | SVNITELNVLQLEILKNQLDQEVKFSSTSITQPRVVQTKYVEAKECLNMLNK-NKGKELFIPLTSSTYVS |
Parental | GKLHGVEHVLIDVGTGYYVEKTAEDAKDFFKRKIDFLTKQMEKIQPALQEKHAMKQAVMEMMSQKIQQLT |
GKLH.V.HVLIDV.TGYYVEKTAEDAKDFFK.KIDFL..QMEKIQPALQ.KH.MKQ.VM..MSQKIQQLT | |
Retrocopy | GKLHDVAHVLIDVATGYYVEKTAEDAKDFFK-KIDFLNRQMEKIQPALQQKHGMKQVVMKIMSQKIQQLT |
Parental | ALGATQATAKA |
ALGATQ.TAKA | |
Retrocopy | ALGATQTTAKA |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |