Parental gene:

UBXN2A, ENSCHOG00000001640

Aliases:None
Description:UBX domain protein 2A [Source:HGNC Symbol;Acc:27265]
Organism:Sloth (Choloepus hoffmanni)
Coordinates:GeneScaffold_6531:881..20761(+)


>ENSCHOG00000001640
ATGAAAGAAGTAGACAATCTTGAAAGTATAAATGAAGAATGGGTTTGTGAAACAGGTTCTGACAACCAACCTCTTAGTGA
CAACCAGCAAACAGATTGTGAATATTTTGTTGACAGCCTTTTTGAGGAAGCACAGAAGACTGGTGCCAAATGCTTGTCAC
CCACTGAAGAAAAGAAACAGGTAGATGTTAGTATCACATTATGGAAAAATGGGTTTACAGTCAATGATGATTTCAGAAGT
TATTCTGATGGTGCGAGTCAACAGTTTCTGAACTCCATCAAAAAGGGGGAATTACCTTTAGAATTACAGGGAATTTTTGA
TAAAGAAGAGTTGGATGTTAAAGTTGAAGATAAAAAAAATGAAATATGTGTGTCAACGAAGCCTGTATTCCAGCCGTTCT
CAGGCCAGGGTCACAGACTAGGAAGTGCCACACCAAAAATTATTTCTAAAGCAAAGAGTATTGAAGTAAAGAATAAAAAT
AATATGTCTGCTGTCCCACTAAACAACTTGGAACCTATCACTAATATACAGATCTGGTTAGCCAATGGGAAAAGGGTCAT
CCAGAAATTTAACATTTCTCATAGGGTAAGCCACATCAAAGACTTCATCGAAAAATACCAAGGATCTCAGAGAAGTCCTC
CCTTTTCTCTGGCCACAGCTCTCCCTTTCCTCAAATTGCTAGATGAAACGCTCACACTGGAAGAAGCAGATTTACAGAAC
GCTGTCATCATTCAGAGACTCCAAAAAGCTGCTGACCCTTGTAGAGGACTTTCACATTGA

Species Parental gene accession Homology type Retrogenes number
Callithrix jacchus ENSCJAG00000007665 ortholog_one2one 1 retrogene
retro_cjac_2085,
Equus caballus ENSECAG00000020144 ortholog_one2one 1 retrogene
retro_ecab_569,
Echinops telfairi ENSETEG00000002623 ortholog_one2one 1 retrogene
retro_etel_1116,
Homo sapiens ENSG00000173960 ortholog_one2one 1 retrogene
retro_hsap_2025,
Gorilla gorilla ENSGGOG00000002445 ortholog_one2one 1 retrogene
retro_ggor_1463,
Myotis lucifugus ENSMLUG00000015640 ortholog_one2one 1 retrogene
retro_mluc_1195,
Macaca mulatta ENSMMUG00000006487 ortholog_one2one 1 retrogene
retro_mmul_2068,
Mus musculus ENSMUSG00000020634 ortholog_one2one 1 retrogene
retro_mmus_1007,
Nomascus leucogenys ENSNLEG00000000751 ortholog_one2one 1 retrogene
retro_nleu_2612,
Oryctolagus cuniculus ENSOCUG00000008783 ortholog_one2many 1 retrogene
retro_ocun_207,
Otolemur garnettii ENSOGAG00000000025 ortholog_one2one 1 retrogene
retro_ogar_1909,
Procavia capensis ENSPCAG00000011502 ortholog_one2one 4 retrogenes
retro_pcap_169, retro_pcap_255, retro_pcap_271, retro_pcap_323,
Pan troglodytes ENSPTRG00000011705 ortholog_one2one 1 retrogene
retro_ptro_1347,
Rattus norvegicus ENSRNOG00000004950 ortholog_one2one 2 retrogenes
retro_rnor_1746, retro_rnor_2966,
Sorex araneus ENSSARG00000010108 ortholog_one2one 1 retrogene
retro_sara_272,
Sus scrofa ENSSSCG00000026283 ortholog_one2one 1 retrogene
retro_sscr_537,
Tupaia belangeri ENSTBEG00000012158 ortholog_one2one 1 retrogene
retro_tbel_3887,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_chof_961 97.18 54.44
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2. retro_chof_964 77.93 83.40
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3. retro_chof_1096 87.71 69.11
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4. retro_chof_1171 80.00 78.76
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5. retro_chof_2641 97.87 54.44
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Download FASTA sequences of all ENSCHOG00000001640 retrocopies