Parental gene:

Ubxn2a, ENSRNOG00000004950

Aliases:None
Description:UBX domain-containing protein 2A [Source:RefSeq peptide;Acc:NP_001102952]
Organism:Rat (Rattus norvegicus)
Coordinates:6:40892610..40914105(+)


>ENSRNOG00000004950
ATGAAAGAAGTAGATAATCTTGACAGTATAAAAGAAGAATGGGTTTGTGAAACAGGACCTCCTGACAATCAACCCCTCAA
TGATAATCCACAAAAGGACTGTGAATATTTTGTTGACAGCCTTTTTGAGGAAGCAGAGAAGGCTGGTGCCAAATGCTTGT
CCCCCACTGAACAGAAGAAACAGGTAGATGTAAATATAAAATTGTGGAAAAATGGATTCACTGTCAATGATGATTTTAGA
AGTTACTCTGATGGTGCAAGTCAGCAGTTTCTGAACTCCATCAAAAAGGGGGAATTACCTTCAGAATTACAGGGAGTTTT
TGATAAAGATGAGGTGGATGTTAAAGTTGAAGATAAAAAAAATGAAGTATGTATGTCTACAAAGCCTGTGTTCCAACCCT
TCTCAGGACAGGGCCACAGACTAGGAAGTGCTACACCAAGAATCGTTTCTAAAGCAAAGAGTATTGAAGTTGACAATAAA
AGCACTTTGTCTGCTGTTTCACTGAACAACTTGGAACCCATCACCAGGATCCAGATCTGGTTAGCCAACGGGGAAAGGAC
TGTCCAAAGATTTAACATTTCTCATAGGGTGAGCCACATCAAAGACTTCATTGAAAAATACCAAGGAACTCAGAGAAGCC
CTCCCTTTGCCCTGGCAACAGCTCTTCCTTTCCTCAGATTTCTGGATGAGACGCTCACATTGGAAGAAGCAGACTTGCAG
AATGCTGTAATCATTCAGAGACTCCAAAAAACTGCCGAACCTTTTAGAAAACTCTGA

Library Parental gene expression (RPM)
SRP017611_liver 3 .77 RPM
SRP017611_kidney 6 .56 RPM
SRP017611_brain 3 .45 RPM



Species Parental gene accession Homology type Retrogenes number
Choloepus hoffmanni ENSCHOG00000001640 ortholog_one2one 5 retrogenes
retro_chof_1096, retro_chof_1171, retro_chof_2641, retro_chof_961, retro_chof_964,
Callithrix jacchus ENSCJAG00000007665 ortholog_one2one 1 retrogene
retro_cjac_2085,
Equus caballus ENSECAG00000020144 ortholog_one2one 1 retrogene
retro_ecab_569,
Echinops telfairi ENSETEG00000002623 ortholog_one2one 1 retrogene
retro_etel_1116,
Homo sapiens ENSG00000173960 ortholog_one2one 1 retrogene
retro_hsap_2025,
Gorilla gorilla ENSGGOG00000002445 ortholog_one2one 1 retrogene
retro_ggor_1463,
Myotis lucifugus ENSMLUG00000015640 ortholog_one2one 1 retrogene
retro_mluc_1195,
Macaca mulatta ENSMMUG00000006487 ortholog_one2one 1 retrogene
retro_mmul_2068,
Mus musculus ENSMUSG00000020634 ortholog_one2one 1 retrogene
retro_mmus_1007,
Nomascus leucogenys ENSNLEG00000000751 ortholog_one2one 1 retrogene
retro_nleu_2612,
Oryctolagus cuniculus ENSOCUG00000008783 ortholog_one2many 1 retrogene
retro_ocun_207,
Otolemur garnettii ENSOGAG00000000025 ortholog_one2one 1 retrogene
retro_ogar_1909,
Procavia capensis ENSPCAG00000011502 ortholog_one2one 4 retrogenes
retro_pcap_169, retro_pcap_255, retro_pcap_271, retro_pcap_323,
Pan troglodytes ENSPTRG00000011705 ortholog_one2one 1 retrogene
retro_ptro_1347,
Sorex araneus ENSSARG00000010108 ortholog_one2one 1 retrogene
retro_sara_272,
Sus scrofa ENSSSCG00000026283 ortholog_one2one 1 retrogene
retro_sscr_537,
Tupaia belangeri ENSTBEG00000012158 ortholog_one2one 1 retrogene
retro_tbel_3887,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_rnor_1746 98.07 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_rnor_2966 98.07 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSRNOG00000004950 retrocopies