Parental gene: | UBXN2A, ENSPCAG00000011502 |
| Aliases: | None |
| Description: | UBX domain protein 2A [Source:HGNC Symbol;Acc:27265] |
| Organism: | Hyrax (Procavia capensis) |
| Coordinates: | GeneScaffold_6137:2601..29412(+) |
>ENSPCAG00000011502
GTTTGTGAAACTGGATCTGACAGTCTACCTGTTAATGATAATCGACAGAGAAATTGTGAGTATTTTGTTGATAGCCTTTT
TGATGAAGCTCAGAAGGTTGGTGCCAAATGCTTGTCACCTGCTGAAAAAAAGAACCAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGAATTGCCTTTAGAATTACAGGGGGCTTTTAATAAAGAGGAAGTGGATGTTAAAGTTGAAGATAAGAAAAATGA
AGTATGTGTGTCAACAAAACCTGTATTCCAGCCCTTCTCAGGACAGGGTCACAGATTGGGAAGTGCCACACCTAAAATTG
TTTCTAAACTGAAGAGTACTGAAGTAGAGAATGAAAACCATCCGTGTACTATCCCATTGAACAACCTGGAACCCATCACT
AACATACAGATCTGGCTAGCCAATGGGAAAAGGATTGTCCAGAAATTTAACATTTCTCATAGGGTAAGCCACATCAAGGA
CTTCATTGAAAAATCCCAAGGATCTCGGAGAGGCCCTCCCTTCTGTCTGGCAACGGCGCTTCCCTTCGTCAGACTGCTGG
ATGAGACGCTAACCCTGGCAGAAGCTGGTTTACAGAATGCTGTGATCATTCAGAGACTCCAGAGAGCAGCTGAGCCTTTC
AAAGGACTTCCCCATTGG
GTTTGTGAAACTGGATCTGACAGTCTACCTGTTAATGATAATCGACAGAGAAATTGTGAGTATTTTGTTGATAGCCTTTT
TGATGAAGCTCAGAAGGTTGGTGCCAAATGCTTGTCACCTGCTGAAAAAAAGAACCAGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNGGAATTGCCTTTAGAATTACAGGGGGCTTTTAATAAAGAGGAAGTGGATGTTAAAGTTGAAGATAAGAAAAATGA
AGTATGTGTGTCAACAAAACCTGTATTCCAGCCCTTCTCAGGACAGGGTCACAGATTGGGAAGTGCCACACCTAAAATTG
TTTCTAAACTGAAGAGTACTGAAGTAGAGAATGAAAACCATCCGTGTACTATCCCATTGAACAACCTGGAACCCATCACT
AACATACAGATCTGGCTAGCCAATGGGAAAAGGATTGTCCAGAAATTTAACATTTCTCATAGGGTAAGCCACATCAAGGA
CTTCATTGAAAAATCCCAAGGATCTCGGAGAGGCCCTCCCTTCTGTCTGGCAACGGCGCTTCCCTTCGTCAGACTGCTGG
ATGAGACGCTAACCCTGGCAGAAGCTGGTTTACAGAATGCTGTGATCATTCAGAGACTCCAGAGAGCAGCTGAGCCTTTC
AAAGGACTTCCCCATTGG
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Choloepus hoffmanni | ENSCHOG00000001640 | ortholog_one2one | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007665 | ortholog_one2one | 1 retrogene | |
| Equus caballus | ENSECAG00000020144 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000002623 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000173960 | ortholog_one2one | 1 retrogene | |
| Gorilla gorilla | ENSGGOG00000002445 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000015640 | ortholog_one2one | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000006487 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000020634 | ortholog_one2one | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000000751 | ortholog_one2one | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000008783 | ortholog_one2many | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000025 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000011705 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000004950 | ortholog_one2one | 2 retrogenes | |
| Sorex araneus | ENSSARG00000010108 | ortholog_one2one | 1 retrogene | |
| Sus scrofa | ENSSSCG00000026283 | ortholog_one2one | 1 retrogene | |
| Tupaia belangeri | ENSTBEG00000012158 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pcap_169 | 64.60 | 65.45 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pcap_255 | 80.25 | 65.04 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pcap_271 | 83.64 | 66.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pcap_323 | 77.64 | 65.04 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPCAG00000011502 retrocopies