Parental gene:

FABP3, ENSDNOG00000000511

Aliases:None
Description:fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) [Source:HGNC Symbol;Acc:3557]
Organism:Armadillo (Dasypus novemcinctus)
Coordinates:GeneScaffold_2435:51528..54915(-)


>ENSDNOG00000000511
GTGGGTTTTGCTATCAGGCAGGTGGGCGCCATGACCAAGCCCTTCACAATCATCGAACAGAATGGGGACACAATCACCAT
AAAGACACAGAGCACTTTCAAGAGCACGGAGATCAGCTTCCAGCTAGGGGTAGAATTTGATGAGACAACAGCAGATGACA
GGAAAGTCAAGTCCATTGTGACACTTGATGGAGGCAAACTCGTCCATGTGCAGAAGTGGAATGGGCAAGAGACAACACTT
GTGCGGGAGCTAAAAGACGGGAAACTCATCCTGACACTCACTCTTGGCAATGTGGTTAGCACTCGCATTTATGAGAAGGA
GGCATGA

Library Parental gene expression (RPM)
SRP012922_ascending_colon 29 .17 RPM
SRP012922_cerebellum 18 .15 RPM
SRP012922_heart 761 .99 RPM
SRP012922_kidney 47 .64 RPM
SRP012922_liver 0 .15 RPM
SRP012922_lung 7 .94 RPM
SRP012922_quadricep_muscle 656 .68 RPM
SRP012922_spleen 0 .92 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016819 ortholog_one2one 2 retrogenes
retro_btau_1467, retro_btau_295,
Danio rerio ENSDARG00000023290 ortholog_one2one 1 retrogene
retro_drer_33,
Dasypus novemcinctus ENSDNOG00000018066 within_species_paralog 5 retrogenes
retro_dnov_1073, retro_dnov_1231, retro_dnov_1318, retro_dnov_2392, retro_dnov_559,
Equus caballus ENSECAG00000024852 ortholog_one2one 1 retrogene
retro_ecab_519,
Homo sapiens ENSG00000121769 ortholog_one2one 1 retrogene
retro_hsap_1258,
Gorilla gorilla ENSGGOG00000014432 ortholog_one2one 1 retrogene
retro_ggor_990,
Macropus eugenii ENSMEUG00000012501 ortholog_one2one 6 retrogenes
retro_meug_1037, retro_meug_148, retro_meug_1660, retro_meug_273, retro_meug_563, retro_meug_819,
Microcebus murinus ENSMICG00000009359 ortholog_one2one 4 retrogenes
retro_mmur_1490, retro_mmur_203, retro_mmur_621, retro_mmur_734,
Myotis lucifugus ENSMLUG00000013609 ortholog_one2many 2 retrogenes
retro_mluc_1144, retro_mluc_1717,
Mus musculus ENSMUSG00000028773 ortholog_one2many 3 retrogenes
retro_mmus_2804, retro_mmus_3204, retro_mmus_65,
Nomascus leucogenys ENSNLEG00000001586 ortholog_one2one 1 retrogene
retro_nleu_2097,
Otolemur garnettii ENSOGAG00000013757 ortholog_one2one 4 retrogenes
retro_ogar_1148, retro_ogar_1312, retro_ogar_1873, retro_ogar_959,
Pongo abelii ENSPPYG00000001616 ortholog_one2one 1 retrogene
retro_pabe_1048,
Pan troglodytes ENSPTRG00000000457 ortholog_one2one 1 retrogene
retro_ptro_3047,
Rattus norvegicus ENSRNOG00000012879 ortholog_one2one 1 retrogene
retro_rnor_2199,
Ictidomys tridecemlineatus ENSSTOG00000003842 ortholog_one2one 3 retrogenes
retro_itri_1544, retro_itri_640, retro_itri_641,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_dnov_1510 57.41 99.07
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2. retro_dnov_2482 72.15 71.30
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Download FASTA sequences of all ENSDNOG00000000511 retrocopies