Parental gene:

FABP3, ENSG00000121769

Aliases:None
Description:fatty acid binding protein 3, muscle and heart (mammary-derived growth inhibitor) [Source:HGNC Symbol;Acc:3557]
Organism:Human (Homo sapiens)
Coordinates:1:31838471..31849697(-)


>ENSG00000121769
ATGGTGGACGCTTTCCTGGGCACCTGGAAGCTAGTGGACAGCAAGAATTTCGATGACTACATGAAGTCACTCGGTGTGGG
TTTTGCTACCAGGCAGGTGGCCAGCATGACCAAGCCTACCACAATCATCGAAAAGAATGGGGACATTCTCACCCTAAAAA
CACACAGCACCTTCAAGAACACAGAGATCAGCTTTAAGTTGGGGGTGGAGTTCGATGAGACAACAGCAGATGACAGGAAG
GTCAAGTCCATTGTGACACTGGATGGAGGGAAACTTGTTCACCTGCAGAAATGGGACGGGCAAGAGACCACACTTGTGCG
GGAGCTAATTGATGGAAAACTCATCCTGACACTCACCCACGGCACTGCAGTTTGCACTCGCACTTATGAGAAAGAGGCAT
GA

Library Parental gene expression (RPM)
bodymap2_liver 1 .29 RPM
bodymap2_lung 7 .49 RPM
bodymap2_breast 15 .02 RPM
bodymap2_adipose 6 .30 RPM
bodymap2_adrenal 18 .01 RPM
bodymap2_skeletal_muscle 185 .32 RPM
bodymap2_thyroid 105 .70 RPM
bodymap2_prostate 14 .51 RPM
bodymap2_colon 6 .05 RPM
bodymap2_testis 21 .25 RPM
bodymap2_brain 30 .26 RPM
bodymap2_heart 1157 .55 RPM
bodymap2_white_blood_cells 0 .77 RPM
bodymap2_lymph_node 10 .36 RPM
bodymap2_ovary 11 .57 RPM
bodymap2_kidney 40 .18 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016819 ortholog_one2one 2 retrogenes
retro_btau_1467, retro_btau_295,
Danio rerio ENSDARG00000023290 ortholog_one2one 1 retrogene
retro_drer_33,
Dasypus novemcinctus ENSDNOG00000000511 ortholog_one2one 2 retrogenes
retro_dnov_1510, retro_dnov_2482,
Equus caballus ENSECAG00000024852 ortholog_one2one 1 retrogene
retro_ecab_519,
Homo sapiens ENSG00000164434 within_species_paralog 1 retrogene
retro_hsap_536,
Homo sapiens ENSG00000164687 within_species_paralog 12 retrogenes
retro_hsap_1205, retro_hsap_1279, retro_hsap_1520, retro_hsap_1521, retro_hsap_2167, retro_hsap_2568, retro_hsap_3000, retro_hsap_3357, retro_hsap_3376, retro_hsap_3811, retro_hsap_4717, retro_hsap_880,
Homo sapiens ENSG00000197416 within_species_paralog 1 retrogene
retro_hsap_3679,
Gorilla gorilla ENSGGOG00000014432 ortholog_one2one 1 retrogene
retro_ggor_990,
Macropus eugenii ENSMEUG00000012501 ortholog_one2one 6 retrogenes
retro_meug_1037, retro_meug_148, retro_meug_1660, retro_meug_273, retro_meug_563, retro_meug_819,
Microcebus murinus ENSMICG00000009359 ortholog_one2one 4 retrogenes
retro_mmur_1490, retro_mmur_203, retro_mmur_621, retro_mmur_734,
Myotis lucifugus ENSMLUG00000013609 ortholog_one2many 2 retrogenes
retro_mluc_1144, retro_mluc_1717,
Mus musculus ENSMUSG00000028773 ortholog_one2many 3 retrogenes
retro_mmus_2804, retro_mmus_3204, retro_mmus_65,
Nomascus leucogenys ENSNLEG00000001586 ortholog_one2one 1 retrogene
retro_nleu_2097,
Otolemur garnettii ENSOGAG00000013757 ortholog_one2one 4 retrogenes
retro_ogar_1148, retro_ogar_1312, retro_ogar_1873, retro_ogar_959,
Pongo abelii ENSPPYG00000001616 ortholog_one2one 1 retrogene
retro_pabe_1048,
Pan troglodytes ENSPTRG00000000457 ortholog_one2one 1 retrogene
retro_ptro_3047,
Rattus norvegicus ENSRNOG00000012879 ortholog_one2one 1 retrogene
retro_rnor_2199,
Ictidomys tridecemlineatus ENSSTOG00000003842 ortholog_one2one 3 retrogenes
retro_itri_1544, retro_itri_640, retro_itri_641,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_1258 82.58 99.25
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Download FASTA sequences of all ENSG00000121769 retrocopies