Parental gene:

FABP3, ENSPTRG00000000457

Aliases:None
Description:None
Organism:Chimpanzee (Pan troglodytes)
Coordinates:1:31478424..31486238(-)


>ENSPTRG00000000457
ATGGTGGACGCTTTCCTGGGCACCTGGAAGCTAGTGGACAGCAAGAATTTCGATGACTACATGAAGTCACTCGGTGTGGG
TTTTGCTACCAGGCAGGTGGCCAGCATGACCAAGCCTACCACAATCATCGAAAAGAATGGGGACATTCTCACCCTAAAAA
CACACAGCACCTTCAAGAACACAGAGATCAGCTTTAAGTTGGGGGTGGAGTTCGATGAGACAACAGCAGATGACAGGAAG
GTCAAGTCCATTGTGACACTGGATGGAGGGAAACTTGTTCACCTGCAGAAATGGGACGGGCAAGAGACCACACTTGTGCG
GGAGCTAATTGATGGAAAACTCATCCTGACACTCACCCATGGCACTGCAGTTTGCACTCGCACTTATGAGAAAGAGGCAT
GA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 58 .16 RPM
SRP007412_cerebellum 7 .67 RPM
SRP007412_heart 927 .05 RPM
SRP007412_kidney 330 .69 RPM
SRP007412_liver 6 .32 RPM
SRP007412_testis 5 .16 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016819 ortholog_one2one 2 retrogenes
retro_btau_1467, retro_btau_295,
Danio rerio ENSDARG00000023290 ortholog_one2one 1 retrogene
retro_drer_33,
Dasypus novemcinctus ENSDNOG00000000511 ortholog_one2one 2 retrogenes
retro_dnov_1510, retro_dnov_2482,
Equus caballus ENSECAG00000024852 ortholog_one2one 1 retrogene
retro_ecab_519,
Homo sapiens ENSG00000121769 ortholog_one2one 1 retrogene
retro_hsap_1258,
Gorilla gorilla ENSGGOG00000014432 ortholog_one2one 1 retrogene
retro_ggor_990,
Macropus eugenii ENSMEUG00000012501 ortholog_one2one 6 retrogenes
retro_meug_1037, retro_meug_148, retro_meug_1660, retro_meug_273, retro_meug_563, retro_meug_819,
Microcebus murinus ENSMICG00000009359 ortholog_one2one 4 retrogenes
retro_mmur_1490, retro_mmur_203, retro_mmur_621, retro_mmur_734,
Myotis lucifugus ENSMLUG00000013609 ortholog_one2many 2 retrogenes
retro_mluc_1144, retro_mluc_1717,
Mus musculus ENSMUSG00000028773 ortholog_one2many 3 retrogenes
retro_mmus_2804, retro_mmus_3204, retro_mmus_65,
Nomascus leucogenys ENSNLEG00000001586 ortholog_one2one 1 retrogene
retro_nleu_2097,
Otolemur garnettii ENSOGAG00000013757 ortholog_one2one 4 retrogenes
retro_ogar_1148, retro_ogar_1312, retro_ogar_1873, retro_ogar_959,
Pongo abelii ENSPPYG00000001616 ortholog_one2one 1 retrogene
retro_pabe_1048,
Pan troglodytes ENSPTRG00000018564 within_species_paralog 1 retrogene
retro_ptro_402,
Pan troglodytes ENSPTRG00000020373 within_species_paralog 12 retrogenes
retro_ptro_1029, retro_ptro_1030, retro_ptro_1498, retro_ptro_1654, retro_ptro_2029, retro_ptro_2131, retro_ptro_2265, retro_ptro_2295, retro_ptro_2664, retro_ptro_3135, retro_ptro_823, retro_ptro_875,
Pan troglodytes ENSPTRG00000022654 within_species_paralog 1 retrogene
retro_ptro_2493,
Rattus norvegicus ENSRNOG00000012879 ortholog_one2one 1 retrogene
retro_rnor_2199,
Ictidomys tridecemlineatus ENSSTOG00000003842 ortholog_one2one 3 retrogenes
retro_itri_1544, retro_itri_640, retro_itri_641,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_3047 81.95 99.25
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Download FASTA sequences of all ENSPTRG00000000457 retrocopies