Parental gene:

RAP1B, ENSG00000127314

Aliases:RAP1B, K-REV, RAL1B
Description:RAP1B, member of RAS oncogene family [Source:HGNC Symbol;Acc:9857]
Organism:Human (Homo sapiens)
Coordinates:12:69004618..69054372(+)


>ENSG00000127314
ATGCGTGAGTATAAGCTAGTCGTTCTTGGCTCAGGAGGCGTTGGAAAGTCTGCTTTGACTGTACAATTTGTTCAAGGAAT
TTTTGTAGAAAAATACGATCCTACGATAGAAGATTCTTATAGAAAGCAAGTTGAAGTAGATGCACAACAGTGTATGCTTG
AAATCTTGGATACTGCAGGAACGGAGCAATTTACAGCAATGAGGGATTTATACATGAAAAATGGACAAGGATTTGCATTA
GTTTATTCCATCACAGCACAGTCCACATTTAACGATTTACAAGACCTGAGAGAACAGATTCTTCGAGTTAAAGACACTGA
TGATGTTCCAATGATTCTTGTTGGTAATAAGTGTGACTTGGAAGATGAAAGAGTTGTAGGGAAGGAACAAGGTCAAAATC
TAGCAAGACAATGGAACAACTGTGCATTCTTAGAATCTTCTGCAAAATCAAAAATAAATGTTAATGAGATCTTTTATGAC
CTAGTGCGGCAAATTAACAGAAAAACTCCAGTGCCTGGGAAGGCTCGCAAAAAGTCATCATGTCAGCTGCTTTAA

Library Parental gene expression (RPM)
bodymap2_liver 32 .61 RPM
bodymap2_lung 180 .94 RPM
bodymap2_breast 111 .32 RPM
bodymap2_adipose 102 .25 RPM
bodymap2_adrenal 94 .14 RPM
bodymap2_skeletal_muscle 25 .19 RPM
bodymap2_thyroid 49 .81 RPM
bodymap2_prostate 100 .02 RPM
bodymap2_colon 78 .62 RPM
bodymap2_testis 73 .24 RPM
bodymap2_brain 32 .39 RPM
bodymap2_heart 23 .45 RPM
bodymap2_white_blood_cells 247 .30 RPM
bodymap2_lymph_node 116 .59 RPM
bodymap2_ovary 55 .19 RPM
bodymap2_kidney 59 .41 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008637 possible_ortholog 1 retrogene
retro_amel_103,
Cavia porcellus ENSCPOG00000008272 ortholog_one2one 4 retrogenes
retro_cpor_1194, retro_cpor_632, retro_cpor_739, retro_cpor_85,
Dipodomys ordii ENSDORG00000001086 ortholog_one2one 1 retrogene
retro_dord_521,
Echinops telfairi ENSETEG00000000242 ortholog_one2one 1 retrogene
retro_etel_11,
Homo sapiens ENSG00000006451 other_paralog 2 retrogenes
retro_hsap_1136, retro_hsap_3707,
Homo sapiens ENSG00000116473 within_species_paralog 1 retrogene
retro_hsap_1364,
Homo sapiens ENSG00000133703 other_paralog 1 retrogene
retro_hsap_3474,
Loxodonta africana ENSLAFG00000016460 ortholog_one2one 1 retrogene
retro_lafr_482,
Myotis lucifugus ENSMLUG00000016606 ortholog_one2one 2 retrogenes
retro_mluc_1126, retro_mluc_2211,
Monodelphis domestica ENSMODG00000007323 ortholog_one2one 5 retrogenes
retro_mdom_11, retro_mdom_1570, retro_mdom_1756, retro_mdom_1897, retro_mdom_429,
Otolemur garnettii ENSOGAG00000005746 possible_ortholog 2 retrogenes
retro_ogar_2260, retro_ogar_272,
Procavia capensis ENSPCAG00000010977 ortholog_one2one 1 retrogene
retro_pcap_8,
Pongo abelii ENSPPYG00000004751 ortholog_one2one 1 retrogene
retro_pabe_3403,
Sus scrofa ENSSSCG00000021148 ortholog_one2one 1 retrogene
retro_sscr_1125,
Sus scrofa ENSSSCG00000030014 possible_ortholog 2 retrogenes
retro_sscr_435, retro_sscr_909,
Tursiops truncatus ENSTTRG00000015712 ortholog_one2one 2 retrogenes
retro_ttru_1105, retro_ttru_134,
Vicugna pacos ENSVPAG00000000931 ortholog_one2one 2 retrogenes
retro_vpac_283, retro_vpac_408,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_hsap_3338 98.91 100.00
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2. retro_hsap_4234 88.71 100.00
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Download FASTA sequences of all ENSG00000127314 retrocopies