Parental gene: | Eif1, ENSMUSG00000035530 |
| Aliases: | Eif1, Sui1-rs1 |
| Description: | eukaryotic translation initiation factor 1 [Source:MGI Symbol;Acc:MGI:105125] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 11:100319884..100322096(+) |
>ENSMUSG00000035530
ATGTCCGCTATCCAGAACCTCCACTCTTTCGACCCCTTTGCTGATGCAAGTAAGGGTGATGACCTGCTTCCTGCTGGCAC
TGAGGATTATATCCATATAAGAATTCAACAGAGAAACGGCAGGAAGACCCTTACCACTGTCCAAGGGATCGCTGATGATT
ACGATAAAAAGAAACTAGTGAAGGCGTTTAAGAAGAAATTTGCCTGCAATGGTACTGTAATTGAGCATCCAGAATATGGA
GAAGTAATTCAGCTACAGGGTGACCAGCGCAAGAACATATGCCAGTTCCTGATAGAGATTGGGCTGGCTAAGGACGATCA
GCTGAAGGTTCATGGGTTTTAA
ATGTCCGCTATCCAGAACCTCCACTCTTTCGACCCCTTTGCTGATGCAAGTAAGGGTGATGACCTGCTTCCTGCTGGCAC
TGAGGATTATATCCATATAAGAATTCAACAGAGAAACGGCAGGAAGACCCTTACCACTGTCCAAGGGATCGCTGATGATT
ACGATAAAAAGAAACTAGTGAAGGCGTTTAAGAAGAAATTTGCCTGCAATGGTACTGTAATTGAGCATCCAGAATATGGA
GAAGTAATTCAGCTACAGGGTGACCAGCGCAAGAACATATGCCAGTTCCTGATAGAGATTGGGCTGGCTAAGGACGATCA
GCTGAAGGTTCATGGGTTTTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 129 .24 RPM |
| SRP007412_cerebellum | 91 .10 RPM |
| SRP007412_heart | 194 .38 RPM |
| SRP007412_kidney | 123 .04 RPM |
| SRP007412_liver | 113 .49 RPM |
| SRP007412_testis | 149 .52 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000002282 | possible_ortholog | 1 retrogene | |
| Callithrix jacchus | ENSCJAG00000012120 | possible_ortholog | 6 retrogenes | |
| Cavia porcellus | ENSCPOG00000014350 | possible_ortholog | 3 retrogenes | |
| Felis catus | ENSFCAG00000024455 | possible_ortholog | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000005077 | possible_ortholog | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000010883 | possible_ortholog | 6 retrogenes | |
| Mus musculus | ENSMUSG00000006941 | within_species_paralog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000011013 | possible_ortholog | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000029667 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000032769 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000033765 | ortholog_one2one | 15 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000005729 | possible_ortholog | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_308 | 91.23 | 100.00 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_512 | 90.18 | 99.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_585 | 84.85 | 58.41 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_840 | 92.86 | 99.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1033 | 79.13 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_1063 | 89.33 | 66.37 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_1191 | 93.75 | 99.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_1213 | 92.71 | 84.96 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_1286 | 59.05 | 89.38 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_1392 | 92.04 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmus_1448 | 74.11 | 98.23 | Please wait, loading | Please wait, loading | Please wait, loading |
| 12. | retro_mmus_1652 | 92.11 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 13. | retro_mmus_2045 | 85.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 14. | retro_mmus_2270 | 90.72 | 85.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 15. | retro_mmus_2604 | 98.59 | 62.83 | Please wait, loading | Please wait, loading | Please wait, loading |
| 16. | retro_mmus_2737 | 88.30 | 82.30 | Please wait, loading | Please wait, loading | Please wait, loading |
| 17. | retro_mmus_2990 | 96.43 | 99.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 18. | retro_mmus_3043 | 93.81 | 85.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 19. | retro_mmus_3047 | 92.66 | 96.46 | Please wait, loading | Please wait, loading | Please wait, loading |
| 20. | retro_mmus_3141 | 82.35 | 59.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 21. | retro_mmus_3164 | 93.81 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 22. | retro_mmus_3386 | 96.36 | 97.35 | Please wait, loading | Please wait, loading | Please wait, loading |
| 23. | retro_mmus_3468 | 95.88 | 85.84 | Please wait, loading | Please wait, loading | Please wait, loading |
| 24. | retro_mmus_3471 | 61.43 | 59.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 25. | retro_mmus_3638 | 60.00 | 59.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 26. | retro_mmus_3639 | 61.43 | 59.29 | Please wait, loading | Please wait, loading | Please wait, loading |
| 27. | retro_mmus_3963 | 86.84 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000035530 retrocopies