Parental gene:

RPS25, ENSPTRG00000004361

Aliases:None
Description:Pan troglodytes ribosomal protein S25 (RPS25), mRNA. [Source:RefSeq mRNA;Acc:NM_001251993]
Organism:Chimpanzee (Pan troglodytes)
Coordinates:11:116948873..116951525(-)


>ENSPTRG00000004361
ATGCCGCCTAAGGACGACAAGAAGAAGAAGGACGCTGGAAAGTCGGCCAAGAAAGACAAAGACCCAGTGAACAAATCCGG
GGGCAAGGCCAAAAAGAAGAAGTGGTCCAAAGGCAAAGTTCGGGACAAGCTCAATAACTTAGTCTTGTTTGACAAAGCTA
CCTATGATAAACTCTGTAAGGAAGTTCCCAACTATAAACTTATAACCCCAGCTGTGGTCTCTGAGAGACTGAAGATTCGA
GGCTCCCTGGCCAGGGCAGCCCTTCAGGAGCTCCTTAGTAAAGGACTTATCAAACTGGTTTCAAAGCACAGAGCTCAAGT
AATTTACACCAGAAATACCAAGGGTGGAGATGCTCCAGCTGCTGGTGAAGATGCATGA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 64 .85 RPM
SRP007412_cerebellum 55 .74 RPM
SRP007412_heart 84 .12 RPM
SRP007412_kidney 127 .65 RPM
SRP007412_liver 95 .88 RPM
SRP007412_testis 59 .75 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000027772 possible_ortholog 2 retrogenes
retro_btau_203, retro_btau_9,
Callithrix jacchus ENSCJAG00000013691 possible_ortholog 1 retrogene
retro_cjac_208,
Dasypus novemcinctus ENSDNOG00000007880 ortholog_one2one 7 retrogenes
retro_dnov_1092, retro_dnov_1566, retro_dnov_2219, retro_dnov_2593, retro_dnov_346, retro_dnov_877, retro_dnov_973,
Mus musculus ENSMUSG00000009927 possible_ortholog 15 retrogenes
retro_mmus_128, retro_mmus_1368, retro_mmus_1455, retro_mmus_1760, retro_mmus_1769, retro_mmus_1788, retro_mmus_2375, retro_mmus_2393, retro_mmus_2641, retro_mmus_2700, retro_mmus_2797, retro_mmus_3218, retro_mmus_336, retro_mmus_3523, retro_mmus_880,
Oryctolagus cuniculus ENSOCUG00000017256 ortholog_one2one 11 retrogenes
retro_ocun_1166, retro_ocun_1231, retro_ocun_1319, retro_ocun_1553, retro_ocun_1761, retro_ocun_291, retro_ocun_298, retro_ocun_548, retro_ocun_623, retro_ocun_856, retro_ocun_978,
Otolemur garnettii ENSOGAG00000007265 possible_ortholog 3 retrogenes
retro_ogar_220, retro_ogar_257, retro_ogar_32,
Sorex araneus ENSSARG00000002284 ortholog_one2one 4 retrogenes
retro_sara_21, retro_sara_212, retro_sara_43, retro_sara_542,
Tupaia belangeri ENSTBEG00000010244 ortholog_one2one 16 retrogenes
retro_tbel_1592, retro_tbel_1823, retro_tbel_1849, retro_tbel_22, retro_tbel_2651, retro_tbel_2744, retro_tbel_3106, retro_tbel_3107, retro_tbel_3499, retro_tbel_374, retro_tbel_3871, retro_tbel_3877, retro_tbel_4239, retro_tbel_4434, retro_tbel_444, retro_tbel_4464,
Tarsius syrichta ENSTSYG00000005422 ortholog_one2one 15 retrogenes
retro_tsyr_1050, retro_tsyr_1098, retro_tsyr_1125, retro_tsyr_1230, retro_tsyr_1252, retro_tsyr_1454, retro_tsyr_154, retro_tsyr_1558, retro_tsyr_2081, retro_tsyr_358, retro_tsyr_414, retro_tsyr_428, retro_tsyr_570, retro_tsyr_859, retro_tsyr_873,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ptro_245 91.67 96.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ptro_536 96.80 100.00
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ptro_1368 97.60 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_ptro_1494 82.79 96.80
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_ptro_1579 73.21 88.80
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_ptro_1722 100.00 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_ptro_1935 75.40 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_ptro_2291 98.40 100.00
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_ptro_2411 90.32 98.40
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_ptro_2918 90.48 100.00
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSPTRG00000004361 retrocopies