RetrogeneDB ID: | retro_amel_1130 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL192935.1:881907..882452(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 74.47 % |
Parental protein coverage: | 85.12 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 5 |
Parental | MGKGDPKKLRGK-MSSYAFFVQTCRE-EHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADK |
MG...PKKLRGK.MS.Y.FFVQTC.E.E.K.KHPDAS..FS..SKKC.ERW.TMS.KEKGKFED.AKADK | |
Retrocopy | MGRRHPKKLRGK>MSLYEFFVQTCLE<EDKMKHPDASTSFSDVSKKCAERWRTMSTKEKGKFEDRAKADK |
Parental | ARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAF-FLFCSEYRPKIKGEHPGLSIGDVAKKLGE-MWNNT |
A.YEREMKT..P.KG..KKKFKDPNAPKRPPSAF.FLFCSEYRP.IKGEH..LSIGDVAKKLGE...N.. | |
Retrocopy | AHYEREMKT*YPLKGKQKKKFKDPNAPKRPPSAF<FLFCSEYRPQIKGEHLSLSIGDVAKKLGE>VSNTA |
Parental | AADDKQPYEKKAAKLKEKYE-KDIAAYRAKGKPDAAKKGVVKAEKSKK |
A.DDKQP..KKAA.LKE.YE.K.IAAY.A.GKPDA..KGVV.A.K.K. | |
Retrocopy | A-DDKQPHGKKAAQLKENYE<KEIAAYGARGKPDATVKGVV*AKKDKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |