RetrogeneDB ID: | retro_amel_1545 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193581.1:187942..188548(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 70.33 % |
Parental protein coverage: | 95.81 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 2 |
Parental | MGKGDPKKLRGKMSSYAFF-VQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA |
MG.G.PKK.RG.MSSYAFF.VQTCREEH..KHPDASV..SEFSK....RWKTMSAKEKGKFED.AK.DKA | |
Retrocopy | MGRGGPKKPRGNMSSYAFF>VQTCREEHENKHPDASVSLSEFSK----RWKTMSAKEKGKFEDVAKGDKA |
Parental | RYEREMKTY-IPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA |
..EREMKTY..P..GETKKKFKDP.A.KRPP..F.LFCSEY..K.KGEHP.L.IG.VAK..GEMW.NTAA | |
Retrocopy | H*EREMKTYMLPITGETKKKFKDPSAFKRPPTTFSLFCSEYWSKLKGEHPALLIGSVAKRPGEMWKNTAA |
Parental | DDKQPYEKKAAKLK-EKYEKDIAAYRAKGKPDAAKKGVVKAEKSKKKKGKEEGEEDEEDEDEEEDEEDE |
DDKQP.E.KA..L...K.EKDIAA..A.GK.DAAKKGV..AEK.K.K......EED.EDE.E.ED..DE | |
Retrocopy | DDKQPHERKATWLR<RKNEKDIAAHPAQGKSDAAKKGVIQAEKNKTKE-DQGNEEDKEDEEEDEDDDDE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |