RetrogeneDB ID: | retro_amel_1299 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193168.1:85522..85969(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 68.39 % |
Parental protein coverage: | 71.16 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 2 |
Parental | MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSA-KEKGKFEDMAKADKA |
.G.GD.KK.RGKMS.YA.FVQTC.E.H.K..PDAS.NFSE....CSE.WKT.SA....GK.ED.AKADKA | |
Retrocopy | VGNGDAKKPRGKMSAYALFVQTC*EKHRKC-PDASENFSE*--ECSESWKTVSA<RKIGKPEDVAKADKA |
Parental | RYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN-TAA |
...REM.TY....GETKKKFKDPNAP.RPP.A.FLF.SEYRP.IKGEH.GLSIGDVAKK.GE.W....A. | |
Retrocopy | HCGREMETYXXXXGETKKKFKDPNAPRRPPLAVFLFSSEYRPQIKGEHLGLSIGDVAKKPGETWRT>CAG |
Parental | DDKQPYEKKAAKLKE |
D.KQP.EKKAA..KE | |
Retrocopy | D-KQPHEKKAARPKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |