RetrogeneDB ID: | retro_amel_1767 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL194251.1:55877..56383(+) | ||
Located in intron of: | ENSAMEG00000012897 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.93 % |
Parental protein coverage: | 78.6 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 1 |
Parental | MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
M.KG.PKKLRG.MSS.AFF.QT..EEHKK.HPDASV..SEFSKK.S.R.K..SAK.K...E..A....AR | |
Retrocopy | MRKGAPKKLRGEMSS*AFFMQTRWEEHKKQHPDASVSCSEFSKKRSGR*KMTSAKQKETVEGTAEVGSAR |
Parental | YEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFL-FCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAAD |
YEREMKTYIP..GETKK.FKD..A.K.PPS.FF..FCSEY.PKIKGEHPGLSIGDVAKKLGE..NNTAAD | |
Retrocopy | YEREMKTYIPTTGETKK-FKDLSASKKPPSVFFVWFCSEYPPKIKGEHPGLSIGDVAKKLGET*NNTAAD |
Parental | DKQPY-EKKAAKLKEKYEKDIAAYRAKGKPD |
DK.PY..KK..KLKEKY..DIA.Y..KGKPD | |
Retrocopy | DKLPY<QKKTVKLKEKYKGDIAVY*TKGKPD |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |