Parental gene:

B4USW9_OTOGA, ENSOGAG00000003205

Aliases:None
Description:High-mobility group box 1 (Predicted) [Source:UniProtKB/TrEMBL;Acc:B4USW9]
Organism:Bushbaby (Otolemur garnettii)
Coordinates:GL873639.1:2209269..2211581(+)


>ENSOGAG00000003205
ATGGGCAAAGGAGATCCTAAGAAGCCGAGAGGCAAAATGTCATCATATGCATTCTTTGTGCAAACTTGTCGGGAGGAGCA
CAAGAAGAAGCACCCAGATGCTTCAGTCAACTTCTCAGAGTTTTCTAAGAAGTGCTCAGAGAGGTGGAAGACCATGTCTG
CTAAAGAGAAAGGAAAATTTGAAGATATGGCAAAGGCGGACAAGGCCCGTTACGAAAGAGAAATGAAAACCTATATCCCT
CCTAAAGGGGAAACAAAAAAGAAGTTCAAGGATCCCAATGCACCCAAGAGGCCTCCTTCGGCCTTTTTCTTGTTCTGTTC
TGAGTATCGCCCCAAAATCAAAGGAGAACATCCCGGCCTATCCATTGGTGATGTTGCAAAGAAGCTGGGAGAGATGTGGA
ATAACACTGCTGCAGATGACAAGCAGCCTTATGAAAAGAAGGCTGCAAAGCTGAAGGAAAAATACGAAAAGGATATTGCT
GCATACCGAGCTAAAGGAAAGCCTGATGCAGCGAAAAAGGGCGTCGTCAAGGCTGAAAAAAGCAAGAAAAAGAAGGAAGA
GGAGGAAGATGAGGAAGATGAAGAGGATGAAGAGGAGGAGGAAGATGAAGAAGATGAAGATGAAGAAGAA

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000008880 possible_ortholog 7 retrogenes
retro_amel_1130, retro_amel_1216, retro_amel_1299, retro_amel_1389, retro_amel_1545, retro_amel_1629, retro_amel_1767,
Bos taurus ENSBTAG00000018103 ortholog_one2one 2 retrogenes
retro_btau_1551, retro_btau_224,
Canis familiaris ENSCAFG00000006597 possible_ortholog 13 retrogenes
retro_cfam_1088, retro_cfam_1102, retro_cfam_1387, retro_cfam_1628, retro_cfam_1765, retro_cfam_1831, retro_cfam_1980, retro_cfam_242, retro_cfam_280, retro_cfam_467, retro_cfam_495, retro_cfam_521, retro_cfam_528,
Choloepus hoffmanni ENSCHOG00000002423 possible_ortholog 16 retrogenes
retro_chof_108, retro_chof_1130, retro_chof_1214, retro_chof_148, retro_chof_164, retro_chof_1708, retro_chof_1741, retro_chof_1764, retro_chof_1797, retro_chof_2155, retro_chof_2484, retro_chof_443, retro_chof_538, retro_chof_591, retro_chof_720, retro_chof_795,
Callithrix jacchus ENSCJAG00000021615 ortholog_one2one 11 retrogenes
retro_cjac_1042, retro_cjac_1546, retro_cjac_1819, retro_cjac_1842, retro_cjac_1934, retro_cjac_2269, retro_cjac_2901, retro_cjac_2934, retro_cjac_3090, retro_cjac_718, retro_cjac_895,
Cavia porcellus ENSCPOG00000003985 possible_ortholog 1 retrogene
retro_cpor_69,
Echinops telfairi ENSETEG00000004048 ortholog_one2many 18 retrogenes
retro_etel_1092, retro_etel_111, retro_etel_1146, retro_etel_1290, retro_etel_1293, retro_etel_146, retro_etel_1481, retro_etel_1587, retro_etel_1892, retro_etel_1943, retro_etel_2015, retro_etel_453, retro_etel_498, retro_etel_508, retro_etel_577, retro_etel_826, retro_etel_827, retro_etel_871,
Homo sapiens ENSG00000189403 ortholog_one2many 37 retrogenes
retro_hsap_1230, retro_hsap_1357, retro_hsap_1504, retro_hsap_1589, retro_hsap_1608, retro_hsap_176, retro_hsap_1832, retro_hsap_1954, retro_hsap_2103, retro_hsap_2192, retro_hsap_2219, retro_hsap_2228, retro_hsap_2340, retro_hsap_2490, retro_hsap_2552, retro_hsap_2613, retro_hsap_2660, retro_hsap_2858, retro_hsap_2947, retro_hsap_3317, retro_hsap_3340, retro_hsap_3592, retro_hsap_3615, retro_hsap_3666, retro_hsap_382, retro_hsap_3942, retro_hsap_4003, retro_hsap_4109, retro_hsap_4309, retro_hsap_4669, retro_hsap_470, retro_hsap_4738, retro_hsap_4832, retro_hsap_525, retro_hsap_554, retro_hsap_758, retro_hsap_933,
Gorilla gorilla ENSGGOG00000026764 possible_ortholog 23 retrogenes
retro_ggor_1057, retro_ggor_1212, retro_ggor_1421, retro_ggor_1596, retro_ggor_1637, retro_ggor_1662, retro_ggor_1735, retro_ggor_1777, retro_ggor_1856, retro_ggor_1951, retro_ggor_1977, retro_ggor_213, retro_ggor_2422, retro_ggor_2441, retro_ggor_2478, retro_ggor_259, retro_ggor_2897, retro_ggor_3013, retro_ggor_388, retro_ggor_448, retro_ggor_483, retro_ggor_753, retro_ggor_964,
Loxodonta africana ENSLAFG00000000269 possible_ortholog 4 retrogenes
retro_lafr_349, retro_lafr_512, retro_lafr_607, retro_lafr_685,
Macropus eugenii ENSMEUG00000001380 possible_ortholog 2 retrogenes
retro_meug_1591, retro_meug_825,
Myotis lucifugus ENSMLUG00000025979 ortholog_one2one 17 retrogenes
retro_mluc_1062, retro_mluc_1103, retro_mluc_1446, retro_mluc_1584, retro_mluc_1591, retro_mluc_1608, retro_mluc_1615, retro_mluc_1773, retro_mluc_1798, retro_mluc_2013, retro_mluc_2201, retro_mluc_2460, retro_mluc_506, retro_mluc_551, retro_mluc_800, retro_mluc_809, retro_mluc_953,
Macaca mulatta ENSMMUG00000023399 possible_ortholog 3 retrogenes
retro_mmul_2079, retro_mmul_320, retro_mmul_385,
Monodelphis domestica ENSMODG00000009238 possible_ortholog 14 retrogenes
retro_mdom_1088, retro_mdom_1144, retro_mdom_1228, retro_mdom_1689, retro_mdom_1727, retro_mdom_1819, retro_mdom_2007, retro_mdom_2024, retro_mdom_3, retro_mdom_434, retro_mdom_548, retro_mdom_72, retro_mdom_760, retro_mdom_958,
Oryctolagus cuniculus ENSOCUG00000021335 possible_ortholog 16 retrogenes
retro_ocun_1039, retro_ocun_1112, retro_ocun_1368, retro_ocun_1407, retro_ocun_1554, retro_ocun_1658, retro_ocun_1739, retro_ocun_1882, retro_ocun_1937, retro_ocun_285, retro_ocun_36, retro_ocun_471, retro_ocun_616, retro_ocun_633, retro_ocun_737, retro_ocun_825,
Otolemur garnettii ENSOGAG00000001773 other_paralog 19 retrogenes
retro_ogar_1318, retro_ogar_1647, retro_ogar_1728, retro_ogar_187, retro_ogar_1930, retro_ogar_204, retro_ogar_2076, retro_ogar_2530, retro_ogar_2591, retro_ogar_2678, retro_ogar_2743, retro_ogar_2983, retro_ogar_3127, retro_ogar_3371, retro_ogar_343, retro_ogar_3433, retro_ogar_3479, retro_ogar_3513, retro_ogar_65,
Otolemur garnettii ENSOGAG00000017149 other_paralog 3 retrogenes
retro_ogar_3117, retro_ogar_3323, retro_ogar_3336,
Otolemur garnettii ENSOGAG00000032147 within_species_paralog 1 retrogene
retro_ogar_1712,
Rattus norvegicus ENSRNOG00000029813 possible_ortholog 1 retrogene
retro_rnor_421,
Sorex araneus ENSSARG00000004470 ortholog_one2many 14 retrogenes
retro_sara_131, retro_sara_182, retro_sara_259, retro_sara_293, retro_sara_302, retro_sara_342, retro_sara_378, retro_sara_402, retro_sara_47, retro_sara_564, retro_sara_576, retro_sara_613, retro_sara_655, retro_sara_765,
Sarcophilus harrisii ENSSHAG00000014034 possible_ortholog 2 retrogenes
retro_shar_136, retro_shar_634,
Ictidomys tridecemlineatus ENSSTOG00000000443 ortholog_one2one 19 retrogenes
retro_itri_1060, retro_itri_1220, retro_itri_127, retro_itri_1489, retro_itri_1531, retro_itri_1580, retro_itri_1644, retro_itri_1852, retro_itri_233, retro_itri_238, retro_itri_444, retro_itri_518, retro_itri_553, retro_itri_584, retro_itri_712, retro_itri_754, retro_itri_792, retro_itri_825, retro_itri_991,
Tarsius syrichta ENSTSYG00000006328 possible_ortholog 7 retrogenes
retro_tsyr_1405, retro_tsyr_1621, retro_tsyr_1744, retro_tsyr_1937, retro_tsyr_1945, retro_tsyr_632, retro_tsyr_76,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ogar_8 89.71 97.14
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_ogar_17 87.25 97.14
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_ogar_92 89.90 99.05
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_ogar_106 88.29 97.62
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_ogar_123 84.76 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_ogar_163 87.56 99.52
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_ogar_172 84.02 92.38
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_ogar_198 95.88 92.38
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_ogar_219 84.24 78.57
Please wait, loading
Please wait, loading
Please wait, loading
10. retro_ogar_250 85.86 94.29
Please wait, loading
Please wait, loading
Please wait, loading
11. retro_ogar_284 83.96 88.57
Please wait, loading
Please wait, loading
Please wait, loading
12. retro_ogar_304 88.04 87.14
Please wait, loading
Please wait, loading
Please wait, loading
13. retro_ogar_311 91.06 84.76
Please wait, loading
Please wait, loading
Please wait, loading
14. retro_ogar_317 91.53 84.29
Please wait, loading
Please wait, loading
Please wait, loading
15. retro_ogar_320 88.24 80.95
Please wait, loading
Please wait, loading
Please wait, loading
16. retro_ogar_422 89.27 84.29
Please wait, loading
Please wait, loading
Please wait, loading
17. retro_ogar_435 72.91 94.29
Please wait, loading
Please wait, loading
Please wait, loading
18. retro_ogar_511 91.77 74.76
Please wait, loading
Please wait, loading
Please wait, loading
19. retro_ogar_542 93.57 80.95
Please wait, loading
Please wait, loading
Please wait, loading
20. retro_ogar_547 89.30 87.62
Please wait, loading
Please wait, loading
Please wait, loading
21. retro_ogar_634 78.14 84.76
Please wait, loading
Please wait, loading
Please wait, loading
22. retro_ogar_663 93.06 68.10
Please wait, loading
Please wait, loading
Please wait, loading
23. retro_ogar_698 88.76 84.76
Please wait, loading
Please wait, loading
Please wait, loading
24. retro_ogar_716 82.39 73.81
Please wait, loading
Please wait, loading
Please wait, loading
25. retro_ogar_772 93.30 84.76
Please wait, loading
Please wait, loading
Please wait, loading
26. retro_ogar_778 75.71 83.33
Please wait, loading
Please wait, loading
Please wait, loading
27. retro_ogar_835 65.52 67.62
Please wait, loading
Please wait, loading
Please wait, loading
28. retro_ogar_890 53.66 94.76
Please wait, loading
Please wait, loading
Please wait, loading
29. retro_ogar_904 92.05 83.33
Please wait, loading
Please wait, loading
Please wait, loading
30. retro_ogar_912 88.46 73.81
Please wait, loading
Please wait, loading
Please wait, loading
31. retro_ogar_918 89.89 84.29
Please wait, loading
Please wait, loading
Please wait, loading
32. retro_ogar_933 88.95 81.43
Please wait, loading
Please wait, loading
Please wait, loading
33. retro_ogar_1008 91.01 84.76
Please wait, loading
Please wait, loading
Please wait, loading
34. retro_ogar_1043 92.57 70.48
Please wait, loading
Please wait, loading
Please wait, loading
35. retro_ogar_1133 86.75 78.57
Please wait, loading
Please wait, loading
Please wait, loading
36. retro_ogar_1232 91.61 68.10
Please wait, loading
Please wait, loading
Please wait, loading
37. retro_ogar_1296 86.67 55.71
Please wait, loading
Please wait, loading
Please wait, loading
38. retro_ogar_1299 78.63 54.76
Please wait, loading
Please wait, loading
Please wait, loading
39. retro_ogar_1330 72.14 66.19
Please wait, loading
Please wait, loading
Please wait, loading
40. retro_ogar_1386 88.30 80.95
Please wait, loading
Please wait, loading
Please wait, loading
41. retro_ogar_1398 91.72 80.48
Please wait, loading
Please wait, loading
Please wait, loading
42. retro_ogar_1399 98.32 56.19
Please wait, loading
Please wait, loading
Please wait, loading
43. retro_ogar_1421 91.76 86.67
Please wait, loading
Please wait, loading
Please wait, loading
44. retro_ogar_1423 89.17 57.14
Please wait, loading
Please wait, loading
Please wait, loading
45. retro_ogar_1424 91.71 86.19
Please wait, loading
Please wait, loading
Please wait, loading
46. retro_ogar_1431 88.31 72.86
Please wait, loading
Please wait, loading
Please wait, loading
47. retro_ogar_1461 85.31 83.81
Please wait, loading
Please wait, loading
Please wait, loading
48. retro_ogar_1560 92.82 84.76
Please wait, loading
Please wait, loading
Please wait, loading
49. retro_ogar_1571 56.41 53.33
Please wait, loading
Please wait, loading
Please wait, loading
50. retro_ogar_1585 88.57 83.33
Please wait, loading
Please wait, loading
Please wait, loading
51. retro_ogar_1597 83.08 60.95
Please wait, loading
Please wait, loading
Please wait, loading
52. retro_ogar_1600 90.64 80.95
Please wait, loading
Please wait, loading
Please wait, loading
53. retro_ogar_1607 84.78 86.19
Please wait, loading
Please wait, loading
Please wait, loading
54. retro_ogar_1628 92.14 66.67
Please wait, loading
Please wait, loading
Please wait, loading
55. retro_ogar_1664 83.06 85.24
Please wait, loading
Please wait, loading
Please wait, loading
56. retro_ogar_1698 90.50 84.76
Please wait, loading
Please wait, loading
Please wait, loading
57. retro_ogar_1738 88.64 83.81
Please wait, loading
Please wait, loading
Please wait, loading
58. retro_ogar_1758 88.95 80.95
Please wait, loading
Please wait, loading
Please wait, loading
59. retro_ogar_1781 82.78 84.29
Please wait, loading
Please wait, loading
Please wait, loading
60. retro_ogar_1843 88.76 84.76
Please wait, loading
Please wait, loading
Please wait, loading
61. retro_ogar_1844 93.79 83.81
Please wait, loading
Please wait, loading
Please wait, loading
62. retro_ogar_1861 90.70 80.95
Please wait, loading
Please wait, loading
Please wait, loading
63. retro_ogar_1867 88.39 72.86
Please wait, loading
Please wait, loading
Please wait, loading
64. retro_ogar_1878 76.74 59.52
Please wait, loading
Please wait, loading
Please wait, loading
65. retro_ogar_1894 84.21 80.95
Please wait, loading
Please wait, loading
Please wait, loading
66. retro_ogar_1896 85.00 84.29
Please wait, loading
Please wait, loading
Please wait, loading
67. retro_ogar_1991 76.43 72.86
Please wait, loading
Please wait, loading
Please wait, loading
68. retro_ogar_2136 89.02 77.62
Please wait, loading
Please wait, loading
Please wait, loading
69. retro_ogar_2165 77.61 94.29
Please wait, loading
Please wait, loading
Please wait, loading
70. retro_ogar_2282 84.27 84.29
Please wait, loading
Please wait, loading
Please wait, loading
71. retro_ogar_2318 71.31 56.67
Please wait, loading
Please wait, loading
Please wait, loading
72. retro_ogar_2319 93.94 93.81
Please wait, loading
Please wait, loading
Please wait, loading
73. retro_ogar_2352 87.79 80.95
Please wait, loading
Please wait, loading
Please wait, loading
74. retro_ogar_2385 90.45 84.76
Please wait, loading
Please wait, loading
Please wait, loading
75. retro_ogar_2403 85.96 80.00
Please wait, loading
Please wait, loading
Please wait, loading
76. retro_ogar_2429 89.92 61.43
Please wait, loading
Please wait, loading
Please wait, loading
77. retro_ogar_2436 80.62 75.71
Please wait, loading
Please wait, loading
Please wait, loading
78. retro_ogar_2458 87.11 91.43
Please wait, loading
Please wait, loading
Please wait, loading
79. retro_ogar_2559 91.01 84.76
Please wait, loading
Please wait, loading
Please wait, loading
80. retro_ogar_2598 88.89 84.76
Please wait, loading
Please wait, loading
Please wait, loading
81. retro_ogar_2615 73.72 73.81
Please wait, loading
Please wait, loading
Please wait, loading
82. retro_ogar_2618 77.44 91.43
Please wait, loading
Please wait, loading
Please wait, loading
83. retro_ogar_2730 87.64 84.76
Please wait, loading
Please wait, loading
Please wait, loading
84. retro_ogar_2777 91.23 81.43
Please wait, loading
Please wait, loading
Please wait, loading
85. retro_ogar_2778 85.71 56.67
Please wait, loading
Please wait, loading
Please wait, loading
86. retro_ogar_2814 63.64 80.95
Please wait, loading
Please wait, loading
Please wait, loading
87. retro_ogar_2824 92.25 60.95
Please wait, loading
Please wait, loading
Please wait, loading
88. retro_ogar_2836 88.46 86.19
Please wait, loading
Please wait, loading
Please wait, loading
89. retro_ogar_2845 91.76 80.48
Please wait, loading
Please wait, loading
Please wait, loading
90. retro_ogar_2891 76.11 85.24
Please wait, loading
Please wait, loading
Please wait, loading
91. retro_ogar_2894 89.14 83.33
Please wait, loading
Please wait, loading
Please wait, loading
92. retro_ogar_2906 89.71 64.76
Please wait, loading
Please wait, loading
Please wait, loading
93. retro_ogar_2961 87.13 80.95
Please wait, loading
Please wait, loading
Please wait, loading
94. retro_ogar_3008 90.50 84.76
Please wait, loading
Please wait, loading
Please wait, loading
95. retro_ogar_3018 92.07 78.10
Please wait, loading
Please wait, loading
Please wait, loading
96. retro_ogar_3028 90.00 66.67
Please wait, loading
Please wait, loading
Please wait, loading
97. retro_ogar_3136 90.32 88.10
Please wait, loading
Please wait, loading
Please wait, loading
98. retro_ogar_3208 90.83 51.90
Please wait, loading
Please wait, loading
Please wait, loading
99. retro_ogar_3230 77.68 52.38
Please wait, loading
Please wait, loading
Please wait, loading
100. retro_ogar_3325 87.80 96.67
Please wait, loading
Please wait, loading
Please wait, loading
101. retro_ogar_3330 89.36 89.05
Please wait, loading
Please wait, loading
Please wait, loading
102. retro_ogar_3355 92.18 84.76
Please wait, loading
Please wait, loading
Please wait, loading
103. retro_ogar_3374 67.63 96.67
Please wait, loading
Please wait, loading
Please wait, loading
104. retro_ogar_3500 75.21 57.62
Please wait, loading
Please wait, loading
Please wait, loading
Download FASTA sequences of all ENSOGAG00000003205 retrocopies