RetrogeneDB ID: | retro_amel_1216 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193059.1:830678..831124(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 67.95 % |
Parental protein coverage: | 71.16 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAK-EKGKFEDMAKADKA |
.G.GD.KK.RGK.S.Y..FVQTC...H.K.HPDAS.NFSE....CSE.WKT.SA....GK.ED.AKADKA | |
Retrocopy | VGNGDAKKPRGKISAYVLFVQTC*GKHRK-HPDASENFSE*--ECSESWKTVSAE<KIGKPEDVAKADKA |
Parental | RYEREMKTYIPPK-GETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNN-TA |
...REM.TYIPPK.GETKKKFKDPNAP.RPP.A.FLF.SEYRP.IKGEH.GLSIGDVAKK.GE.W....A | |
Retrocopy | HCGREMETYIPPK<GETKKKFKDPNAPRRPPLAVFLFSSEYRPQIKGEHLGLSIGDVAKKPGETWRT>RA |
Parental | ADDKQPYEKKAAKLKE |
.D.KQ..EKK.A..KE | |
Retrocopy | GD-KQRHEKKVARPKE |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |