RetrogeneDB ID: | retro_amel_1389 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193308.1:43132..43666(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 66.3 % |
Parental protein coverage: | 82.33 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | MGKGDPKKLRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKAR |
MGK.DPKKLRGKMS.YAF.VQTC..EHKKKHPDASV.FSEFSKKCSE.WKTM.AK.K...E.M.K.DK.. | |
Retrocopy | MGKRDPKKLRGKMSFYAFSVQTC*QEHKKKHPDASVSFSEFSKKCSEKWKTMFAKDKRNLEGMTKVDKTG |
Parental | YER-EMKTYIPPKGETKKK--FKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTA |
YER.E.K...P..G.......FK.P.APKR.PSA..LFC.EY.P.I.GE...L.IGD.AKKLGE.WNN.A | |
Retrocopy | YER>E*KLISPLQGKXXXXXXFKGPSAPKRHPSAI-LFCAEYYPQITGEYSSLYIGDIAKKLGERWNNIA |
Parental | ADDKQPYEKKAAKLKEKYEKDIA-AYRAKGKPDAAKKGVVK |
.DDK..Y...AA.LKEKYEKDI...Y.AKGKPD.AKKGV.. | |
Retrocopy | MDDKKHYD*NAARLKEKYEKDIT<SY*AKGKPDVAKKGVIQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |