RetrogeneDB ID: | retro_amel_1629 | ||
Retrocopylocation | Organism: | Panda (Ailuropoda melanoleuca) | |
Coordinates: | GL193799.1:357614..358133(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSAMEG00000008880 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 77.84 % |
Parental protein coverage: | 80.93 % |
Number of stop codons detected: | 5 |
Number of frameshifts detected | 2 |
Parental | MGKGDPKKLRGK-MSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKFEDMAKADKA |
M..GDPKK.RGK.MSSYAFFV.TC.EEHKKKH.DASVN.SEFSKKC.ERWK..SAKEKGKFED.AK...A | |
Retrocopy | MCRGDPKKPRGK<MSSYAFFV*TCQEEHKKKHLDASVNLSEFSKKC*ERWKIISAKEKGKFEDVAKPNEA |
Parental | RYEREMKTYIPPKGETKKKFKDP-NAPKRPPSAFFLFCSEYRPKIKGEHPGLSIGDVAKKLGEMWNNTAA |
.YERE.K.YI..KGETKKKFKDP.NAPK.PP.AFFLFCS.Y..KIKGEHP.LSIGDVAKKLGE...NTAA | |
Retrocopy | HYEREIKAYISSKGETKKKFKDP>NAPKSPPLAFFLFCSKYHSKIKGEHPDLSIGDVAKKLGETRSNTAA |
Parental | DDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKG |
DDK.P...KAAKLKEK..KDIAA.RAK.KPDAA.KG | |
Retrocopy | DDK-PSFHKAAKLKEK*KKDIAA*RAK*KPDAAGKG |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |