RetrogeneDB ID: | retro_itri_1452 | ||
Retrocopylocation | Organism: | Squirrel (Ictidomys tridecemlineatus) | |
Coordinates: | JH393493.1:292693..293116(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSSTOG00000014322 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 90.07 % |
Parental protein coverage: | 97.92 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | LGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYP |
LG.K..RNF.LLE..EEGQKGVGDGTVSWGLED.EDMTL.RW.GMIIGPPRTIYENRIYSLKIECGPKYP | |
Retrocopy | LGSKISRNFQLLE*QEEGQKGVGDGTVSWGLEDGEDMTLMRWIGMIIGPPRTIYENRIYSLKIECGPKYP |
Parental | EAPPFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSIKVVLQELRRLMMSKENMKLPQPPEGQCYS |
EA..FVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYS.KVVLQELR.LMMSKENMKLPQP.EGQCYS | |
Retrocopy | EASLFVRFVTKINMNGVNSSNGVVDPRAISVLAKWQNSYSTKVVLQELRHLMMSKENMKLPQPLEGQCYS |
Parental | N |
N | |
Retrocopy | N |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |