RetrogeneDB ID: | retro_mluc_1877 | ||
Retrocopylocation | Organism: | Microbat (Myotis lucifugus) | |
Coordinates: | GL429934:1283809..1284338(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPL7A | ||
Ensembl ID: | ENSMLUG00000004666 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 71.58 % |
Parental protein coverage: | 66.79 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 4 |
Parental | GKKVAPAPAVVKKQEAKKVVNPLFEKRPKNFGIGQDIQPKRDLTRFVKWPRYIRLQRQRAILYKRLKVPP |
GKKVAPAPA..KKQEAKKVV.PL.EKRPKNFGIGQDIQP.RDLT.FVKWP....LQ.QR.I.Y..LKV.. | |
Retrocopy | GKKVAPAPAIEKKQEAKKVVSPLLEKRPKNFGIGQDIQPQRDLTHFVKWPHSRQLQWQRVIHY-QLKVSL |
Parental | AINQFT-QALDRQTATQLLKLAHKYRPETKQEKKQRLLARAEKKAAGKGDVPTKRPP-VLRAGVNTVTTL |
.INQFT..ALD.Q.ATQLL....KY...TKQEKK..LL..AEKKAA..GDVPTKR.P..L..GVNTVTTL | |
Retrocopy | TINQFT<EALD*QIATQLL*AGPKYKQGTKQEKKLGLLVGAEKKAACRGDVPTKRSP<WLWEGVNTVTTL |
Parental | VENKKAQLVVIAHDVDPIE-LVVFLPALCRK-MGVPYCIIKGK |
V.NKKAQLVVIA.DV.PI..LV.FLP.LC.K...VPYCIIKG. | |
Retrocopy | VDNKKAQLVVIAQDVPPID<LV-FLPVLCHK>RWVPYCIIKGR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |