Parental gene:

MMU.2191, ENSMMUG00000022341

Aliases:None
Description:60S ribosomal protein L7a [Source:RefSeq peptide;Acc:NP_001137511]
Organism:Rhesus macaque (Macaca mulatta)
Coordinates:15:5196697..5199673(-)


>ENSMMUG00000022341
CCGAAAGGAAAGAAGGCCAAGGGAAAGAAGGTGGCTCCGGCCCCTGCTGTCGTGAAAAAGCAGGAGGCCAAGAAAGTGGT
GAATCCCCTGTTTGAGAAAAGACCTAAGAATTTTGGCATTGGACAGGACATCCAGCCCAAAAGAGACCTCACCCGCTTTG
TGAAATGGCCTCGCTATATCAGGTTGCAGCGGCAGAGAGCCATCCTCTATAAGCGGCTGAAAGTGCCTCCTGCTATTAAC
CAGTTCACCCAGGCCCTGGACCGCCAAACAGCTACTCAGCTGCTTAAGCTGGCCCACAAGTACAGACCAGAGACAAAACA
AGAGAAGAAGCAGAGGCTGTTGGCCCGGGCCGAGAAGAAAGCTGCTGGCAAAGGGGATGTCCCCACTAAAAGACCACCTG
TCCTTCGAGCAGGAGTTAACACCGTCACCACCTTGGTGGAGAACAAGAAGGCTCAGCTGGTGGTGATTGCACATGACGTA
GATCCCATCGAGCTGGTTGTCTTCTTGCCTGCCCTGTGTCGTAAAATGGGGGTCCCTTACTGCATTATCAAGGGGAAGGC
CAGACTGGGCCGTCTAGTCCACAGGAAGACCTGCACCACTGTCGCCTTCACACAGGTGAACTCGGAAGACAAAGGCGCTT
TGGCTAAGCTGGTGGAAGCTATCAGGACCAATTACAACGACAGATACGATGAGATCCGCCGTCACTGGGGCGGCAATGTC
CTGGGTCCCAAGTCTGTGGCTCGTATCGCCAAGCTCGAAAAGGCAAAGGCTAAAGAACTTGCCACTAAGCTGGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain 45 .16 RPM
SRP007412_brain_prefrontal_cortex 205 .31 RPM
SRP007412_cerebellum 37 .39 RPM
SRP007412_heart 97 .69 RPM
SRP007412_kidney 79 .22 RPM
SRP007412_liver 190 .72 RPM
SRP007412_testis 200 .42 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 ortholog_one2one 29 retrogenes
Bos taurus ENSBTAG00000011559 possible_ortholog 5 retrogenes
Canis familiaris ENSCAFG00000017680 ortholog_one2one 36 retrogenes
Callithrix jacchus ENSCJAG00000014827 ortholog_one2many 3 retrogenes
Cavia porcellus ENSCPOG00000001324 ortholog_one2one 4 retrogenes
Dasypus novemcinctus ENSDNOG00000024424 possible_ortholog 8 retrogenes
Dipodomys ordii ENSDORG00000006471 ortholog_one2many 3 retrogenes
Felis catus ENSFCAG00000005825 ortholog_one2one 20 retrogenes
Homo sapiens ENSG00000148303 possible_ortholog 21 retrogenes
Gorilla gorilla ENSGGOG00000014442 possible_ortholog 48 retrogenes
Loxodonta africana ENSLAFG00000006436 ortholog_one2one 2 retrogenes
Macropus eugenii ENSMEUG00000014550 ortholog_one2many 16 retrogenes
Myotis lucifugus ENSMLUG00000004666 ortholog_one2one 10 retrogenes
Monodelphis domestica ENSMODG00000012754 ortholog_one2many 3 retrogenes
Mus musculus ENSMUSG00000062647 possible_ortholog 10 retrogenes
Nomascus leucogenys ENSNLEG00000013068 possible_ortholog 22 retrogenes
Otolemur garnettii ENSOGAG00000014027 ortholog_one2one 16 retrogenes
Ochotona princeps ENSOPRG00000005726 possible_ortholog 4 retrogenes
Pongo abelii ENSPPYG00000019730 possible_ortholog 52 retrogenes
Pteropus vampyrus ENSPVAG00000017045 possible_ortholog 11 retrogenes
Rattus norvegicus ENSRNOG00000049097 possible_ortholog 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2many 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000003671 possible_ortholog 3 retrogenes
Tupaia belangeri ENSTBEG00000008595 possible_ortholog 26 retrogenes
Tarsius syrichta ENSTSYG00000005467 possible_ortholog 20 retrogenes
Tursiops truncatus ENSTTRG00000007645 ortholog_one2many 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_mmul_4 93.21 100.00
Please wait, loading
Please wait, loading
Please wait, loading
2. retro_mmul_33 97.35 99.62
Please wait, loading
Please wait, loading
Please wait, loading
3. retro_mmul_113 93.58 100.00
Please wait, loading
Please wait, loading
Please wait, loading
4. retro_mmul_130 98.49 100.00
Please wait, loading
Please wait, loading
Please wait, loading
5. retro_mmul_204 98.11 100.00
Please wait, loading
Please wait, loading
Please wait, loading
6. retro_mmul_230 98.11 100.00
Please wait, loading
Please wait, loading
Please wait, loading
7. retro_mmul_252 98.87 100.00
Please wait, loading
Please wait, loading
Please wait, loading
8. retro_mmul_259 98.41 95.09
Please wait, loading
Please wait, loading
Please wait, loading
9. retro_mmul_309 82.89 99.25
Please wait, loading
Please wait, loading
Please wait, loading

Download FASTA sequences of all ENSMMUG00000022341 retrocopies