Parental gene:

RPL7A, ENSMEUG00000014550

Aliases:None
Description:ribosomal protein L7a [Source:HGNC Symbol;Acc:10364]
Organism:Wallaby (Macropus eugenii)
Coordinates:GeneScaffold_5729:10998..15168(+)


>ENSMEUG00000014550
ATGCCAAAGGGGAAGAAGGCCAAGGGGAAGAAGGTGGCTCCGGCCCCTGCTGTGGTAAAGAAGCAGGAGGCCAAGAAAGT
GGTCAATCCTTTGTTTGAGAAACGACCCAAGAACTTTGGCATTGGTCAGGACATCCAGCCCAAAAGGGACCTTACTCGAT
TTGTCAAATGGCCTCGGTACATCAGACTGCAGCGTCAAAGGTCTATCCTTTATAAACGTTTGAAAGTCCCACCTGCAATT
AACCAATTCACCCAAGCTTTGGATCGTCAGACAGCTACTCAGCTGCTTAAACTGGCTCACAAGTATAGACCAGAGACAAA
GCAAGATAAGAAACAAAGGCTGCTGGCTCGGGCGGAACAAAAGGCTGCAGGCAAAGGAGACATCCCCACTAAGAGACCAC
CAGTCCTCAGAGCAGGTGTTAACACTGTTACTACCCTGGTAGAAAACAAGAAAGCACAGTTGGTAGTGATTGCACATGAT
GTGGACCCCATTGAGCTAGTGGTCTTCCTACCTGCCTTGTGCCGGAAAATGGGGGTTCCTTACTGTATTATCAAAGGTAA
AGCCAGACTGGGTCGCTTAGTTCACAGAAAGACCTGCACAAGCATTGCCTTCACACAGGTTAACCCTGAAGATAAGGGAG
CTTTGGCTAAGCTGGTAGAAGCCATCAAAACCAATTACAACGACAGATATGATGAGATCCGTCGTCACTGGGGTGGCAAT
GTTCTGGGTCCAAAATCAGTGGCTCGTATTGCCAAGCTGGAAAAGGCAAAAGCTAAGGAACTCGCAACCAAATTGGGTTA
A

Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 ortholog_one2many 29 retrogenes
Bos taurus ENSBTAG00000011559 ortholog_one2one 5 retrogenes
Canis familiaris ENSCAFG00000017680 ortholog_one2many 36 retrogenes
Callithrix jacchus ENSCJAG00000014827 ortholog_one2many 3 retrogenes
Cavia porcellus ENSCPOG00000001324 ortholog_one2one 4 retrogenes
Dasypus novemcinctus ENSDNOG00000024424 ortholog_one2one 8 retrogenes
Dipodomys ordii ENSDORG00000006471 ortholog_one2one 3 retrogenes
Equus caballus ENSECAG00000008548 ortholog_one2many 2 retrogenes
Erinaceus europaeus ENSEEUG00000000203 ortholog_one2many 2 retrogenes
Felis catus ENSFCAG00000005825 ortholog_one2many 20 retrogenes
Homo sapiens ENSG00000148303 ortholog_one2one 21 retrogenes
Gorilla gorilla ENSGGOG00000014442 ortholog_one2many 48 retrogenes
Loxodonta africana ENSLAFG00000006436 ortholog_one2many 2 retrogenes
Myotis lucifugus ENSMLUG00000004666 ortholog_one2one 10 retrogenes
Macaca mulatta ENSMMUG00000022341 ortholog_one2many 9 retrogenes
Monodelphis domestica ENSMODG00000012754 ortholog_one2one 3 retrogenes
Mustela putorius furo ENSMPUG00000012398 ortholog_one2many 13 retrogenes
Mus musculus ENSMUSG00000062647 ortholog_one2many 10 retrogenes
Nomascus leucogenys ENSNLEG00000013068 ortholog_one2many 22 retrogenes
Otolemur garnettii ENSOGAG00000014027 ortholog_one2many 16 retrogenes
Ochotona princeps ENSOPRG00000005726 ortholog_one2one 4 retrogenes
Pongo abelii ENSPPYG00000019730 ortholog_one2many 52 retrogenes
Pteropus vampyrus ENSPVAG00000017045 ortholog_one2one 11 retrogenes
Rattus norvegicus ENSRNOG00000049097 ortholog_one2many 10 retrogenes
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2one 4 retrogenes
Ictidomys tridecemlineatus ENSSTOG00000003671 ortholog_one2many 3 retrogenes
Tupaia belangeri ENSTBEG00000008595 ortholog_one2many 26 retrogenes
Tarsius syrichta ENSTSYG00000005467 ortholog_one2one 20 retrogenes
Tursiops truncatus ENSTTRG00000007645 ortholog_one2one 3 retrogenes

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_meug_133 75.92 70.68
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2. retro_meug_401 81.20 99.62
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3. retro_meug_632 54.25 56.02
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4. retro_meug_654 98.88 66.92
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5. retro_meug_687 95.11 100.00
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6. retro_meug_699 88.68 99.62
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7. retro_meug_919 89.12 54.89
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8. retro_meug_1268 86.09 100.00
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9. retro_meug_1362 81.61 97.37
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10. retro_meug_1523 86.35 100.00
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11. retro_meug_1581 76.13 57.52
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12. retro_meug_1872 79.87 59.40
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13. retro_meug_2011 80.75 69.55
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14. retro_meug_2080 88.06 50.38
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15. retro_meug_2101 92.51 100.00
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16. retro_meug_2123 71.70 77.82
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Download FASTA sequences of all ENSMEUG00000014550 retrocopies