Parental gene:

ENSGGOG00000014442

Aliases:None
Description:None
Organism:Gorilla (Gorilla gorilla)
Coordinates:9:116963831..116966349(+)


>ENSGGOG00000014442
CTTTCTGCCCAGCCGAAAGGAAAGAAGGCCAAGGGAAAGAAGGTGGCTCCGGCCCCAGCTGTCGTGAAGAAGCAGGAGGC
TAAGAAAGTGGTGAATCCCCTGTTTGAGAAAAGGCCTAAGAATTTTGGCATTGGACAGGACATCCAGCCCAAGAGAGACC
TCACCCGCTTTGTGAAATGGCCCCGCTATATCAGGTTGCAGCGGCAGAGAGCCATCCTCTATAAGCGGCTGAAAGTGCCT
CCTGCGATTAACCAGTTCACCCAGGCCCTGGACCGCCAAACAGCTACTCAGCTGCTTAAGCTGGCCCACAAGTACAGACC
AGAGACAAAGCAAGAGAAGAAGCAGAGACTGTTGGCCCGGGCCGAGAAGAAAGCTGCTGGCAAAGGGGACGTCCCGACGA
AGAGACCACCTGTCCTTCGAGCAGGAGTTAACACCGTCACCACCTTGGTGGAGAACAAGAAAGCTCAGCTGGTGGTGATT
GCACACGACGTGGATCCCATCGAGCTGGTTGTCTTCTTGCCTGCCCTGTGTCGTAAAATGGGGGTCCCTTACTGCATTAT
CAAGGGGAAGGCAAGACTGGGACGTCTAGTCCACAGGAAGACCTGCACCACTGTCGCCTTCACACAGGTGAACTCGGAAG
ACAAAGGCGCTTTGGCTAAGCTGGTGGAAGCTATCAGGACCAATTACAATGACAGATACGATGAGATCCGCCGTCACTGG
GGTGGCAATATCCTGGGTCCTAAATCTGTGGCTCGTATCGCCAAGCTCGAAAAGGCAAAGGCTAAAGAACTTGCCACTAA
ACTGGGTTAA

Library Parental gene expression (RPM)
SRP007412_brain_prefrontal_cortex 178 .34 RPM
SRP007412_cerebellum 170 .91 RPM
SRP007412_heart 128 .24 RPM
SRP007412_kidney 367 .06 RPM
SRP007412_liver 347 .77 RPM
SRP007412_testis 247 .50 RPM



Species Parental gene accession Homology type Retrogenes number
Ailuropoda melanoleuca ENSAMEG00000011708 possible_ortholog 29 retrogenes
retro_amel_1000, retro_amel_1058, retro_amel_1149, retro_amel_1159, retro_amel_1207, retro_amel_1220, retro_amel_1269, retro_amel_1314, retro_amel_1417, retro_amel_142, retro_amel_1429, retro_amel_1471, retro_amel_1499, retro_amel_1506, retro_amel_1641, retro_amel_1644, retro_amel_169, retro_amel_170, retro_amel_1812, retro_amel_1873, retro_amel_357, retro_amel_463, retro_amel_525, retro_amel_529, retro_amel_544, retro_amel_671, retro_amel_726, retro_amel_758, retro_amel_801,
Bos taurus ENSBTAG00000011559 possible_ortholog 5 retrogenes
retro_btau_1345, retro_btau_1494, retro_btau_564, retro_btau_890, retro_btau_936,
Canis familiaris ENSCAFG00000017680 possible_ortholog 36 retrogenes
retro_cfam_1121, retro_cfam_1123, retro_cfam_1165, retro_cfam_1187, retro_cfam_1242, retro_cfam_1365, retro_cfam_1429, retro_cfam_1471, retro_cfam_1497, retro_cfam_1532, retro_cfam_1553, retro_cfam_1563, retro_cfam_1683, retro_cfam_1711, retro_cfam_1721, retro_cfam_1750, retro_cfam_1865, retro_cfam_1898, retro_cfam_2032, retro_cfam_2103, retro_cfam_2111, retro_cfam_2120, retro_cfam_2144, retro_cfam_311, retro_cfam_340, retro_cfam_380, retro_cfam_423, retro_cfam_476, retro_cfam_518, retro_cfam_605, retro_cfam_694, retro_cfam_723, retro_cfam_827, retro_cfam_853, retro_cfam_927, retro_cfam_935,
Callithrix jacchus ENSCJAG00000014827 possible_ortholog 3 retrogenes
retro_cjac_199, retro_cjac_343, retro_cjac_49,
Cavia porcellus ENSCPOG00000001324 possible_ortholog 4 retrogenes
retro_cpor_1296, retro_cpor_423, retro_cpor_828, retro_cpor_850,
Dasypus novemcinctus ENSDNOG00000024424 possible_ortholog 8 retrogenes
retro_dnov_1245, retro_dnov_1509, retro_dnov_169, retro_dnov_1861, retro_dnov_2538, retro_dnov_2591, retro_dnov_302, retro_dnov_825,
Dipodomys ordii ENSDORG00000006471 ortholog_one2many 3 retrogenes
retro_dord_198, retro_dord_218, retro_dord_516,
Equus caballus ENSECAG00000008548 possible_ortholog 2 retrogenes
retro_ecab_4, retro_ecab_402,
Erinaceus europaeus ENSEEUG00000000203 possible_ortholog 2 retrogenes
retro_eeur_114, retro_eeur_490,
Felis catus ENSFCAG00000005825 possible_ortholog 20 retrogenes
retro_fcat_1123, retro_fcat_1137, retro_fcat_1170, retro_fcat_1277, retro_fcat_1315, retro_fcat_1318, retro_fcat_1344, retro_fcat_1528, retro_fcat_1583, retro_fcat_1771, retro_fcat_1980, retro_fcat_214, retro_fcat_252, retro_fcat_385, retro_fcat_389, retro_fcat_468, retro_fcat_542, retro_fcat_628, retro_fcat_694, retro_fcat_943,
Homo sapiens ENSG00000148303 possible_ortholog 21 retrogenes
retro_hsap_1229, retro_hsap_1438, retro_hsap_2037, retro_hsap_2544, retro_hsap_3019, retro_hsap_3081, retro_hsap_3133, retro_hsap_3202, retro_hsap_3421, retro_hsap_3503, retro_hsap_3668, retro_hsap_3830, retro_hsap_3890, retro_hsap_428, retro_hsap_4296, retro_hsap_467, retro_hsap_4754, retro_hsap_682, retro_hsap_707, retro_hsap_801, retro_hsap_809,
Loxodonta africana ENSLAFG00000006436 possible_ortholog 2 retrogenes
retro_lafr_1059, retro_lafr_1132,
Macropus eugenii ENSMEUG00000014550 ortholog_one2many 16 retrogenes
retro_meug_1268, retro_meug_133, retro_meug_1362, retro_meug_1523, retro_meug_1581, retro_meug_1872, retro_meug_2011, retro_meug_2080, retro_meug_2101, retro_meug_2123, retro_meug_401, retro_meug_632, retro_meug_654, retro_meug_687, retro_meug_699, retro_meug_919,
Myotis lucifugus ENSMLUG00000004666 possible_ortholog 10 retrogenes
retro_mluc_1033, retro_mluc_1087, retro_mluc_1359, retro_mluc_1365, retro_mluc_1745, retro_mluc_1877, retro_mluc_2074, retro_mluc_541, retro_mluc_558, retro_mluc_670,
Macaca mulatta ENSMMUG00000022341 possible_ortholog 9 retrogenes
retro_mmul_113, retro_mmul_130, retro_mmul_204, retro_mmul_230, retro_mmul_252, retro_mmul_259, retro_mmul_309, retro_mmul_33, retro_mmul_4,
Monodelphis domestica ENSMODG00000012754 ortholog_one2many 3 retrogenes
retro_mdom_1347, retro_mdom_418, retro_mdom_586,
Mustela putorius furo ENSMPUG00000012398 possible_ortholog 13 retrogenes
retro_mputfur_1081, retro_mputfur_1210, retro_mputfur_1281, retro_mputfur_1344, retro_mputfur_1380, retro_mputfur_1611, retro_mputfur_1612, retro_mputfur_325, retro_mputfur_459, retro_mputfur_656, retro_mputfur_698, retro_mputfur_792, retro_mputfur_900,
Mus musculus ENSMUSG00000062647 ortholog_many2many 10 retrogenes
retro_mmus_120, retro_mmus_141, retro_mmus_165, retro_mmus_166, retro_mmus_214, retro_mmus_226, retro_mmus_267, retro_mmus_34, retro_mmus_43, retro_mmus_93,
Nomascus leucogenys ENSNLEG00000013068 possible_ortholog 22 retrogenes
retro_nleu_1051, retro_nleu_1056, retro_nleu_137, retro_nleu_1404, retro_nleu_1418, retro_nleu_1682, retro_nleu_1920, retro_nleu_2130, retro_nleu_2254, retro_nleu_2341, retro_nleu_2397, retro_nleu_2423, retro_nleu_2641, retro_nleu_267, retro_nleu_2822, retro_nleu_2853, retro_nleu_399, retro_nleu_432, retro_nleu_562, retro_nleu_780, retro_nleu_796, retro_nleu_82,
Otolemur garnettii ENSOGAG00000014027 possible_ortholog 16 retrogenes
retro_ogar_1014, retro_ogar_1172, retro_ogar_1638, retro_ogar_1735, retro_ogar_1815, retro_ogar_2774, retro_ogar_3012, retro_ogar_3097, retro_ogar_319, retro_ogar_404, retro_ogar_57, retro_ogar_685, retro_ogar_758, retro_ogar_850, retro_ogar_926, retro_ogar_994,
Ochotona princeps ENSOPRG00000005726 possible_ortholog 4 retrogenes
retro_opri_451, retro_opri_629, retro_opri_65, retro_opri_922,
Pongo abelii ENSPPYG00000019730 ortholog_one2one 52 retrogenes
retro_pabe_1022, retro_pabe_1104, retro_pabe_1112, retro_pabe_1160, retro_pabe_1189, retro_pabe_1305, retro_pabe_1368, retro_pabe_1652, retro_pabe_1662, retro_pabe_1871, retro_pabe_2059, retro_pabe_2264, retro_pabe_2286, retro_pabe_2305, retro_pabe_2394, retro_pabe_2501, retro_pabe_2522, retro_pabe_2534, retro_pabe_2553, retro_pabe_2588, retro_pabe_2654, retro_pabe_267, retro_pabe_271, retro_pabe_2896, retro_pabe_293, retro_pabe_2960, retro_pabe_3009, retro_pabe_3033, retro_pabe_3079, retro_pabe_3118, retro_pabe_3171, retro_pabe_3231, retro_pabe_330, retro_pabe_3444, retro_pabe_3467, retro_pabe_3469, retro_pabe_3500, retro_pabe_3700, retro_pabe_379, retro_pabe_519, retro_pabe_540, retro_pabe_549, retro_pabe_581, retro_pabe_645, retro_pabe_664, retro_pabe_682, retro_pabe_715, retro_pabe_725, retro_pabe_755, retro_pabe_864, retro_pabe_914, retro_pabe_963,
Pteropus vampyrus ENSPVAG00000017045 possible_ortholog 11 retrogenes
retro_pvam_1240, retro_pvam_125, retro_pvam_1288, retro_pvam_1371, retro_pvam_1472, retro_pvam_270, retro_pvam_307, retro_pvam_333, retro_pvam_510, retro_pvam_540, retro_pvam_640,
Rattus norvegicus ENSRNOG00000049097 ortholog_many2many 10 retrogenes
retro_rnor_123, retro_rnor_15, retro_rnor_238, retro_rnor_303, retro_rnor_323, retro_rnor_346, retro_rnor_368, retro_rnor_398, retro_rnor_403, retro_rnor_86,
Sarcophilus harrisii ENSSHAG00000004337 ortholog_one2many 4 retrogenes
retro_shar_157, retro_shar_338, retro_shar_401, retro_shar_494,
Ictidomys tridecemlineatus ENSSTOG00000003671 ortholog_many2many 3 retrogenes
retro_itri_1034, retro_itri_53, retro_itri_920,
Tupaia belangeri ENSTBEG00000008595 ortholog_one2many 26 retrogenes
retro_tbel_1102, retro_tbel_112, retro_tbel_1314, retro_tbel_1420, retro_tbel_1484, retro_tbel_174, retro_tbel_1770, retro_tbel_1892, retro_tbel_1916, retro_tbel_2015, retro_tbel_2063, retro_tbel_2630, retro_tbel_2748, retro_tbel_2896, retro_tbel_3005, retro_tbel_3017, retro_tbel_3445, retro_tbel_4295, retro_tbel_4298, retro_tbel_4737, retro_tbel_542, retro_tbel_686, retro_tbel_861, retro_tbel_949, retro_tbel_950, retro_tbel_960,
Tarsius syrichta ENSTSYG00000005467 possible_ortholog 20 retrogenes
retro_tsyr_1009, retro_tsyr_1012, retro_tsyr_1166, retro_tsyr_1168, retro_tsyr_1280, retro_tsyr_1346, retro_tsyr_158, retro_tsyr_1798, retro_tsyr_182, retro_tsyr_1824, retro_tsyr_1939, retro_tsyr_2039, retro_tsyr_214, retro_tsyr_251, retro_tsyr_484, retro_tsyr_63, retro_tsyr_696, retro_tsyr_880, retro_tsyr_907, retro_tsyr_911,
Tursiops truncatus ENSTTRG00000007645 ortholog_one2many 3 retrogenes
retro_ttru_1334, retro_ttru_1681, retro_ttru_1824,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_ggor_172 90.31 95.91
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2. retro_ggor_194 85.28 98.51
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3. retro_ggor_288 78.52 98.51
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4. retro_ggor_310 73.46 76.21
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5. retro_ggor_333 90.15 98.14
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6. retro_ggor_386 80.97 97.40
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7. retro_ggor_539 68.05 97.77
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8. retro_ggor_626 83.73 61.34
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9. retro_ggor_636 82.69 95.91
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10. retro_ggor_640 67.04 98.51
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11. retro_ggor_658 69.68 81.04
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12. retro_ggor_663 73.56 75.09
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13. retro_ggor_815 81.27 98.51
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14. retro_ggor_865 81.86 84.01
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15. retro_ggor_904 90.57 98.14
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16. retro_ggor_963 60.13 55.02
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17. retro_ggor_1034 79.25 89.22
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18. retro_ggor_1042 82.72 60.22
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19. retro_ggor_1087 87.42 59.11
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20. retro_ggor_1107 82.05 99.63
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21. retro_ggor_1190 94.89 87.36
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22. retro_ggor_1249 88.09 87.36
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23. retro_ggor_1408 75.32 85.13
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24. retro_ggor_1409 95.86 98.51
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25. retro_ggor_1460 67.68 96.65
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26. retro_ggor_1541 83.15 100.00
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27. retro_ggor_1591 95.85 98.51
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28. retro_ggor_1724 70.74 98.51
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29. retro_ggor_1881 92.59 100.00
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30. retro_ggor_2004 76.92 52.42
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31. retro_ggor_2033 88.15 99.63
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32. retro_ggor_2087 57.79 86.99
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33. retro_ggor_2117 96.61 65.80
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34. retro_ggor_2147 90.95 73.98
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35. retro_ggor_2313 83.77 98.51
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36. retro_ggor_2410 86.35 99.63
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37. retro_ggor_2430 85.77 98.51
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38. retro_ggor_2480 74.14 97.03
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39. retro_ggor_2522 74.03 56.88
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40. retro_ggor_2578 77.96 68.03
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41. retro_ggor_2611 79.86 53.16
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42. retro_ggor_2617 78.20 98.14
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43. retro_ggor_2618 78.20 98.14
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44. retro_ggor_2779 85.88 97.03
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45. retro_ggor_2781 71.14 89.22
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46. retro_ggor_2871 75.62 59.48
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47. retro_ggor_2872 75.62 59.48
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48. retro_ggor_2960 64.68 79.93
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Download FASTA sequences of all ENSGGOG00000014442 retrocopies