RetrogeneDB ID: | retro_tsyr_1142 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_321399:36..419(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | CETN2 | ||
Ensembl ID: | ENSTSYG00000003831 | ||
Aliases: | None | ||
Description: | centrin, EF-hand protein, 2 [Source:HGNC Symbol;Acc:1867] |
Percent Identity: | 86.26 % |
Parental protein coverage: | 74.42 % |
Number of stop codons detected: | 2 |
Number of frameshifts detected | 3 |
Parental | ASNFKKGNMASSAQRKRMSPKPELTEEQKQ-EIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIK |
ASNFKKGN.ASSAQ.KRMSP.PELTEEQKQ.EI.E.F.LFDA.GTGT.DVKELKVAMRALGFE.KKEEIK | |
Retrocopy | ASNFKKGNIASSAQ*KRMSPQPELTEEQKQ<EIQEGFYLFDAYGTGTTDVKELKVAMRALGFESKKEEIK |
Parental | KMISEIDKEG-TGKMNFSDFLTVMTQKMSEKDTKEEIL-KAFKLFDDDETGKISFKNLKRV |
.MISEIDKEG.TGK.NFSD..TVMTQKM.EKDTK.EIL.KAFKLFDDDETGKISFKNLKRV | |
Retrocopy | *MISEIDKEG<TGKINFSDSFTVMTQKMFEKDTKKEIL>KAFKLFDDDETGKISFKNLKRV |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |