Parental gene:

LSM6, ENSBTAG00000014060

Aliases:None
Description:U6 snRNA-associated Sm-like protein LSm6 [Source:RefSeq peptide;Acc:NP_001107991]
Organism:Cow (Bos taurus)
Coordinates:17:12322225..12340189(-)


>ENSBTAG00000014060
ATGAGTCTGCGGAAGCAAACGCCCAGTGACTTCCTGAAGCAGATCATTGGGCGACCAGTTGTGGTGAAGCTAAATTCGGG
AGTGGATTATCGAGGGGTCCTGGCTTGCCTGGATGGCTACATGAATATAGCCTTGGAGCAGACAGAGGAGTATGTAAATG
GACAGCTGAAGAATAAGTATGGGGATGCATTTATCCGAGGAAACAATGTGTTGTATATAAGTACACAGAAGAGGAGGATG
TGA

Library Parental gene expression (RPM)
SRP017611_brain 13 .02 RPM
SRP017611_kidney 20 .75 RPM
SRP017611_liver 12 .31 RPM
ERP005899_muscle 13 .41 RPM
ERP005899_liver 16 .58 RPM
SRP030211_testis 20 .39 RPM



Species Parental gene accession Homology type Retrogenes number
Bos taurus ENSBTAG00000016271 within_species_paralog 1 retrogene
retro_btau_765,
Cavia porcellus ENSCPOG00000015389 ortholog_one2one 1 retrogene
retro_cpor_368,
Dasypus novemcinctus ENSDNOG00000009322 ortholog_one2one 5 retrogenes
retro_dnov_1118, retro_dnov_176, retro_dnov_2092, retro_dnov_301, retro_dnov_664,
Homo sapiens ENSG00000164167 ortholog_one2one 2 retrogenes
retro_hsap_1948, retro_hsap_2107,
Gorilla gorilla ENSGGOG00000001310 ortholog_one2one 2 retrogenes
retro_ggor_1417, retro_ggor_1638,
Myotis lucifugus ENSMLUG00000026355 ortholog_one2one 1 retrogene
retro_mluc_1859,
Monodelphis domestica ENSMODG00000000526 ortholog_one2one 4 retrogenes
retro_mdom_1027, retro_mdom_1383, retro_mdom_1983, retro_mdom_621,
Nomascus leucogenys ENSNLEG00000005584 ortholog_one2one 2 retrogenes
retro_nleu_1275, retro_nleu_1479,
Otolemur garnettii ENSOGAG00000026665 ortholog_one2many 1 retrogene
retro_ogar_233,
Sus scrofa ENSSSCG00000009036 ortholog_one2one 2 retrogenes
retro_sscr_474, retro_sscr_475,
Tarsius syrichta ENSTSYG00000012759 ortholog_one2one 4 retrogenes
retro_tsyr_1332, retro_tsyr_1727, retro_tsyr_340, retro_tsyr_653,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_btau_861 93.75 100.00
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Download FASTA sequences of all ENSBTAG00000014060 retrocopies