Parental gene: | NARF, ENSCAFG00000012976 |
| Aliases: | None |
| Description: | nuclear prelamin A recognition factor [Source:HGNC Symbol;Acc:29916] |
| Organism: | Dog (Canis familiaris) |
| Coordinates: | JH373243.1:59750..78634(+) |
>ENSCAFG00000012976
ATGAAGTGTGAGCACTGCACGCGGAAGGAATGTAATAAGAAAACAAAGACCGAGGACCAAGAGAATGCGTCAGTCGGCGT
ACCGAGCCTGGCCCAGGACCATACAGAGAAGGGAGAATTCCATAAGTTGGCTGATGCCAAGATATTTCTGAGCGACTGCC
TGGCGTGTGACAGCTGTGTGACCGCGGAGGAGGGACTCCAGGTTTCTCAGCAGAACGTCAAGGACTTCTTTCGAGTTCTG
AACCTCAATAAGAAATGTGACCCTTCACAGCACAAGGTGCTGGCAGTGTCGGTGTGCCCTCAGTCTCTGCCTTACTTTGC
TGCCAAATTCCGCCTCAGTGTGACTGATGCTTCCAGAAGACTCTGCGGCTTCCTCAAAAGTCTTGGGGTGCACTATGTGT
TTGATACAACAATAGCCGCAGATTTCAGCATCCTGGAGAGTCAAAAGGAGTTCGTGCGTCGATACCAGCAGCACAGCGAG
GAAGAGCCCGCGCTGCCCATGCTCACCTCCGCCTGTCCAGGCTGGGTCCGATACGCCGAACGAGTGCTGGGCCACCCCGT
TACCCCCCACCTGTGTACCGCCAAGTCTCCTCAACAGATCATGGGCTCTCTGGTGAAGGATTATTTCGCCAGGCAGCAGA
ACCTGTCCCCAGACAAGATTTTCCATGTTATTGTGGCTCCTTGCTACGATAAGAAACTGGAGGCCCTTCGAGAAGACTTC
CCCACCGCTCCACATGGCTTCCGGAGTGCTGACTGCGTATTAACCTCAGGTGAAATCGCTCAAATAATGGAGCAAAGTGA
CCTCACGGTGAAGGATGCTGCCGTCGACACTGTGTTTGGAGGCCTGAAGGAGGAGGAGGTGAGGCGCCACGACGGAGCCA
GCTCCGACGGGTACCTGGCGCACGTCTTCAGACACGCAGCCAAGCAGCTGTTTGACGAGGATGTGGGGGAGGTCACCTAC
CGCACCCTGAGGAACAAAGACTTCCAGGAGGTGACCCTTGAAAAGAACGGAGAGGTTCTGTTACGCTTCGCTGCTGCGTA
CGGCTTCCGAAACATCCAGAACGTGGTTCTGAAACTGAAGAAAGGCAGGTTCCCGTACCACTTCGTGGAGGTGCTCGCCT
GCGCGGGGGGATGTTTAAATGGCAGAGGCCAAGCCCAGACCGAGGACGGGCGCGCGGACAAGGCGCTGCTGCGGCAGATG
GAGGGCATCTACGCAGACATCCCCGTGCGGCCCCCCGAGAGCAGCGCCCACGTGCAGGAGCTGTACCAGGAGTGGCTGGA
CGGGGCCGACTCACCCAGGGCCCAGGAGGCCCTGCACACCAAGTACCAGGGGCCCGGGCTCCCTGCGCTCAGCCGAGATA
TCAAGTGGTAA
ATGAAGTGTGAGCACTGCACGCGGAAGGAATGTAATAAGAAAACAAAGACCGAGGACCAAGAGAATGCGTCAGTCGGCGT
ACCGAGCCTGGCCCAGGACCATACAGAGAAGGGAGAATTCCATAAGTTGGCTGATGCCAAGATATTTCTGAGCGACTGCC
TGGCGTGTGACAGCTGTGTGACCGCGGAGGAGGGACTCCAGGTTTCTCAGCAGAACGTCAAGGACTTCTTTCGAGTTCTG
AACCTCAATAAGAAATGTGACCCTTCACAGCACAAGGTGCTGGCAGTGTCGGTGTGCCCTCAGTCTCTGCCTTACTTTGC
TGCCAAATTCCGCCTCAGTGTGACTGATGCTTCCAGAAGACTCTGCGGCTTCCTCAAAAGTCTTGGGGTGCACTATGTGT
TTGATACAACAATAGCCGCAGATTTCAGCATCCTGGAGAGTCAAAAGGAGTTCGTGCGTCGATACCAGCAGCACAGCGAG
GAAGAGCCCGCGCTGCCCATGCTCACCTCCGCCTGTCCAGGCTGGGTCCGATACGCCGAACGAGTGCTGGGCCACCCCGT
TACCCCCCACCTGTGTACCGCCAAGTCTCCTCAACAGATCATGGGCTCTCTGGTGAAGGATTATTTCGCCAGGCAGCAGA
ACCTGTCCCCAGACAAGATTTTCCATGTTATTGTGGCTCCTTGCTACGATAAGAAACTGGAGGCCCTTCGAGAAGACTTC
CCCACCGCTCCACATGGCTTCCGGAGTGCTGACTGCGTATTAACCTCAGGTGAAATCGCTCAAATAATGGAGCAAAGTGA
CCTCACGGTGAAGGATGCTGCCGTCGACACTGTGTTTGGAGGCCTGAAGGAGGAGGAGGTGAGGCGCCACGACGGAGCCA
GCTCCGACGGGTACCTGGCGCACGTCTTCAGACACGCAGCCAAGCAGCTGTTTGACGAGGATGTGGGGGAGGTCACCTAC
CGCACCCTGAGGAACAAAGACTTCCAGGAGGTGACCCTTGAAAAGAACGGAGAGGTTCTGTTACGCTTCGCTGCTGCGTA
CGGCTTCCGAAACATCCAGAACGTGGTTCTGAAACTGAAGAAAGGCAGGTTCCCGTACCACTTCGTGGAGGTGCTCGCCT
GCGCGGGGGGATGTTTAAATGGCAGAGGCCAAGCCCAGACCGAGGACGGGCGCGCGGACAAGGCGCTGCTGCGGCAGATG
GAGGGCATCTACGCAGACATCCCCGTGCGGCCCCCCGAGAGCAGCGCCCACGTGCAGGAGCTGTACCAGGAGTGGCTGGA
CGGGGCCGACTCACCCAGGGCCCAGGAGGCCCTGCACACCAAGTACCAGGGGCCCGGGCTCCCTGCGCTCAGCCGAGATA
TCAAGTGGTAA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_brain | 34 .62 RPM |
| SRP017611_kidney | 49 .20 RPM |
| SRP017611_liver | 11 .53 RPM |
| SRP012049_cerebellum | 59 .26 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018178 | ortholog_one2one | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000011246 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009329 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017740 | ortholog_one2many | 23 retrogenes |
retro_mluc_1006, retro_mluc_1012, retro_mluc_1083, retro_mluc_1091, retro_mluc_1124, retro_mluc_1256, retro_mluc_1282, retro_mluc_1457, retro_mluc_1573, retro_mluc_1622, retro_mluc_1632, retro_mluc_1700, retro_mluc_1718, retro_mluc_1898, retro_mluc_1973, retro_mluc_2365, retro_mluc_671, retro_mluc_688, retro_mluc_817, retro_mluc_825, retro_mluc_877, retro_mluc_879, retro_mluc_982,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_cfam_659 | 64.24 | 73.46 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSCAFG00000012976 retrocopies