Parental gene: | NARF, ENSDNOG00000011246 |
| Aliases: | None |
| Description: | nuclear prelamin A recognition factor [Source:HGNC Symbol;Acc:29916] |
| Organism: | Armadillo (Dasypus novemcinctus) |
| Coordinates: | GeneScaffold_3698:2622..10263(+) |
>ENSDNOG00000011246
AAGCGCGACCTCTCGACACGCAGCGTGCTGGCCGTGTCTGTGTGCCCTCAGTCTCTGCCGTACTTCGCTGCTAAGCTCGG
CCTCGGAGTGACTGATGCATCCAGAAGACTCTGTGGCTTCCTCAAAGGGCTTGGGGTACACTACGTATTTGACATGACAA
TAGCTGCAGATTTCAGCATCCTGGAGAGCCAGCGAGAATTTGTGCGCCGATACCGCCAGCACCGTGAGGACGACCGGGCC
TTACCCATGCTGACCTCTGCCTGTCCTGGTTGGGTTCAGTACGAGCGGGTGCTGGGCGAGCCCGTCACCCCCCACCTCTG
CACCACCAGGTCCCCCCAGCAGATCATGGGCTCGTTGGTGAAGGATTACTTTGCCAGGCGGCAGAACCTGCCTCCAGAGA
AGGTGGTCCATGTCATCGTGGCGCCCTGCCACGACAGGAAGCTGGAGGCACTGCGAGAAGACCCTCGCGCGGCCCTGCAC
TGCTGCCGGGCGGTCGACTGCGTGTTGACGTCAGGGGAGGCTGCACAGATGATGGAGCAGAGTGACCTCCCGGTGACAGA
AGCCGCCGTTGACACCCTATTTGGAGACTTGGAGGAAGAGGTCAGGCGCCACGAGGGAGCCAACTCGGCCGGGTACCTGG
CGCACGTCTTCAGACACGCAGCCAAGGAGCTGTTCGGCGAGGACGTGGAGGGGGTCACCTGCCGGGCCCTGAGAAACGAG
GACCTGCAGGAGGCCACCGAGAAGAACGGGGCGGCGCTGCTGCGCTCTGCAGCCGCCTGCGGCTTCCGGAACATCCGGAG
CGTGGTCTCGAGGCTGCGGAGGGGCGGGTCCCCCTTCCACTTCGTGGAGGCTCTCGCGTGCCCGGGATGCTTAAACGGCA
GAGGCCAGGCCCAGGACAAGGACGGGCAGGCGGACAGAGCCCTGCTGCGGCAGATGGAAGGCATGCGGCCCCCGGAGAGC
AGCGAGCAGGTGCAGAGGCTGTACCGGGAGTGGCTGGACGGCGCCGGCTCGCCCAGAGCCCAGCAGGCCCTGCACACCGC
GCACCCAGGCCCG
AAGCGCGACCTCTCGACACGCAGCGTGCTGGCCGTGTCTGTGTGCCCTCAGTCTCTGCCGTACTTCGCTGCTAAGCTCGG
CCTCGGAGTGACTGATGCATCCAGAAGACTCTGTGGCTTCCTCAAAGGGCTTGGGGTACACTACGTATTTGACATGACAA
TAGCTGCAGATTTCAGCATCCTGGAGAGCCAGCGAGAATTTGTGCGCCGATACCGCCAGCACCGTGAGGACGACCGGGCC
TTACCCATGCTGACCTCTGCCTGTCCTGGTTGGGTTCAGTACGAGCGGGTGCTGGGCGAGCCCGTCACCCCCCACCTCTG
CACCACCAGGTCCCCCCAGCAGATCATGGGCTCGTTGGTGAAGGATTACTTTGCCAGGCGGCAGAACCTGCCTCCAGAGA
AGGTGGTCCATGTCATCGTGGCGCCCTGCCACGACAGGAAGCTGGAGGCACTGCGAGAAGACCCTCGCGCGGCCCTGCAC
TGCTGCCGGGCGGTCGACTGCGTGTTGACGTCAGGGGAGGCTGCACAGATGATGGAGCAGAGTGACCTCCCGGTGACAGA
AGCCGCCGTTGACACCCTATTTGGAGACTTGGAGGAAGAGGTCAGGCGCCACGAGGGAGCCAACTCGGCCGGGTACCTGG
CGCACGTCTTCAGACACGCAGCCAAGGAGCTGTTCGGCGAGGACGTGGAGGGGGTCACCTGCCGGGCCCTGAGAAACGAG
GACCTGCAGGAGGCCACCGAGAAGAACGGGGCGGCGCTGCTGCGCTCTGCAGCCGCCTGCGGCTTCCGGAACATCCGGAG
CGTGGTCTCGAGGCTGCGGAGGGGCGGGTCCCCCTTCCACTTCGTGGAGGCTCTCGCGTGCCCGGGATGCTTAAACGGCA
GAGGCCAGGCCCAGGACAAGGACGGGCAGGCGGACAGAGCCCTGCTGCGGCAGATGGAAGGCATGCGGCCCCCGGAGAGC
AGCGAGCAGGTGCAGAGGCTGTACCGGGAGTGGCTGGACGGCGCCGGCTCGCCCAGAGCCCAGCAGGCCCTGCACACCGC
GCACCCAGGCCCG
| Library | Parental gene expression (RPM) |
|---|---|
| SRP012922_ascending_colon | 2 .33 RPM |
| SRP012922_cerebellum | 5 .09 RPM |
| SRP012922_heart | 0 .23 RPM |
| SRP012922_kidney | 1 .10 RPM |
| SRP012922_liver | 0 .93 RPM |
| SRP012922_lung | 1 .22 RPM |
| SRP012922_quadricep_muscle | 0 .69 RPM |
| SRP012922_spleen | 4 .01 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Bos taurus | ENSBTAG00000018178 | ortholog_one2one | 1 retrogene | |
| Canis familiaris | ENSCAFG00000012976 | ortholog_one2one | 1 retrogene | |
| Echinops telfairi | ENSETEG00000009329 | ortholog_one2one | 1 retrogene | |
| Myotis lucifugus | ENSMLUG00000017740 | ortholog_one2many | 23 retrogenes |
retro_mluc_1006, retro_mluc_1012, retro_mluc_1083, retro_mluc_1091, retro_mluc_1124, retro_mluc_1256, retro_mluc_1282, retro_mluc_1457, retro_mluc_1573, retro_mluc_1622, retro_mluc_1632, retro_mluc_1700, retro_mluc_1718, retro_mluc_1898, retro_mluc_1973, retro_mluc_2365, retro_mluc_671, retro_mluc_688, retro_mluc_817, retro_mluc_825, retro_mluc_877, retro_mluc_879, retro_mluc_982,
|
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_dnov_1757 | 94.65 | 89.74 | Please wait, loading  | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSDNOG00000011246 retrocopies