Parental gene: | CKS2, ENSEEUG00000004384 |
| Aliases: | None |
| Description: | CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000] |
| Organism: | Hedgehog (Erinaceus europaeus) |
| Coordinates: | GeneScaffold_3111:10793..15940(+) |
>ENSEEUG00000004384
ATGGCCCACAAACAGATCTACTATTCGGATAAGTACTTCGACGAGCACTACGAGTATCGGCATGTTATGTTGCCCAGAGA
ACTTTCCAAACAAGTACCCAAAACCCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGCGTCCAGCAGAGTCTAGGCT
GGGTTCACTACATGATTCACGAACCAGAACCACATATTCTTCTCTTCAGGCGACCTCTTCCAAAAGATCAACAAAAATGA
ATGGCCCACAAACAGATCTACTATTCGGATAAGTACTTCGACGAGCACTACGAGTATCGGCATGTTATGTTGCCCAGAGA
ACTTTCCAAACAAGTACCCAAAACCCATCTGATGTCTGAAGAGGAGTGGAGGAGACTTGGCGTCCAGCAGAGTCTAGGCT
GGGTTCACTACATGATTCACGAACCAGAACCACATATTCTTCTCTTCAGGCGACCTCTTCCAAAAGATCAACAAAAATGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP017611_liver | 1 .93 RPM |
| SRP017611_kidney | 3 .94 RPM |
| SRP017611_brain | 4 .83 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Canis familiaris | ENSCAFG00000002194 | ortholog_one2one | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000007792 | possible_ortholog | 1 retrogene | |
| Dasypus novemcinctus | ENSDNOG00000009427 | ortholog_one2one | 8 retrogenes | |
| Erinaceus europaeus | ENSEEUG00000015895 | within_species_paralog | 1 retrogene | |
| Echinops telfairi | ENSETEG00000001260 | ortholog_one2one | 10 retrogenes | |
| Felis catus | ENSFCAG00000022286 | ortholog_one2one | 1 retrogene | |
| Homo sapiens | ENSG00000123975 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000062248 | ortholog_one2one | 4 retrogenes | |
| Ochotona princeps | ENSOPRG00000007583 | ortholog_one2one | 3 retrogenes | |
| Pongo abelii | ENSPPYG00000025843 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000021093 | ortholog_one2one | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014130 | ortholog_one2many | 5 retrogenes | |
| Sorex araneus | ENSSARG00000002443 | ortholog_one2one | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000000048 | ortholog_one2one | 7 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_eeur_183 | 82.05 | 98.73 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_eeur_255 | 81.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_eeur_293 | 81.01 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_eeur_551 | 78.48 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_eeur_632 | 67.09 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_eeur_639 | 77.50 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_eeur_640 | 86.25 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSEEUG00000004384 retrocopies