Parental gene:

CKS2, ENSETEG00000001260

Aliases:None
Description:CDC28 protein kinase regulatory subunit 2 [Source:HGNC Symbol;Acc:2000]
Organism:Lesser hedgehog tenrec (Echinops telfairi)
Coordinates:GeneScaffold_3027:952..7688(+)


>ENSETEG00000001260
ATGGCTCACAAGCAAATATACTATTCGGACAAGTACTTCGATGAACATTACGAGTACCGGCATGTCATGTTGCCCAGAGA
ACTTTCCAAACAAGTACCCAAAACCCATCTAATGTCCGAAGAGGAGTGGAGGAGACTTGGTGTTCAACAAAGTCTAGGCT
GGGTACATTACATGATTCATGAGCCAGAACCACATATTCTTCTCTTTAGACGACCGCTTCCAAAAGAACAACAAAAATGA

Species Parental gene accession Homology type Retrogenes number
Canis familiaris ENSCAFG00000002194 ortholog_one2one 2 retrogenes
retro_cfam_1495, retro_cfam_472,
Callithrix jacchus ENSCJAG00000007792 ortholog_one2many 1 retrogene
retro_cjac_261,
Dasypus novemcinctus ENSDNOG00000009427 ortholog_one2one 8 retrogenes
retro_dnov_1200, retro_dnov_1527, retro_dnov_195, retro_dnov_1984, retro_dnov_2530, retro_dnov_2532, retro_dnov_585, retro_dnov_755,
Erinaceus europaeus ENSEEUG00000004384 ortholog_one2one 7 retrogenes
retro_eeur_183, retro_eeur_255, retro_eeur_293, retro_eeur_551, retro_eeur_632, retro_eeur_639, retro_eeur_640,
Echinops telfairi ENSETEG00000003337 within_species_paralog 4 retrogenes
retro_etel_1246, retro_etel_1938, retro_etel_239, retro_etel_497,
Homo sapiens ENSG00000123975 ortholog_one2one 1 retrogene
retro_hsap_4183,
Macaca mulatta ENSMMUG00000012534 ortholog_one2one 1 retrogene
retro_mmul_269,
Nomascus leucogenys ENSNLEG00000008729 ortholog_one2one 1 retrogene
retro_nleu_1793,
Otolemur garnettii ENSOGAG00000028843 ortholog_one2one 1 retrogene
retro_ogar_798,
Ochotona princeps ENSOPRG00000007583 ortholog_one2one 3 retrogenes
retro_opri_111, retro_opri_1122, retro_opri_912,
Pongo abelii ENSPPYG00000025843 ortholog_one2many 1 retrogene
retro_pabe_57,
Pan troglodytes ENSPTRG00000021093 ortholog_one2one 1 retrogene
retro_ptro_2837,
Pteropus vampyrus ENSPVAG00000011011 ortholog_one2one 3 retrogenes
retro_pvam_1297, retro_pvam_1307, retro_pvam_605,
Rattus norvegicus ENSRNOG00000014130 ortholog_one2one 5 retrogenes
retro_rnor_1209, retro_rnor_1909, retro_rnor_2742, retro_rnor_279, retro_rnor_402,
Sorex araneus ENSSARG00000002443 ortholog_one2one 1 retrogene
retro_sara_213,
Sus scrofa ENSSSCG00000021161 ortholog_one2one 2 retrogenes
retro_sscr_458, retro_sscr_675,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_etel_229 70.37 100.00
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2. retro_etel_590 88.61 100.00
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3. retro_etel_704 96.15 98.73
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4. retro_etel_717 96.20 100.00
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5. retro_etel_721 76.25 100.00
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6. retro_etel_838 77.03 93.67
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7. retro_etel_979 97.47 100.00
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8. retro_etel_1194 92.41 100.00
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9. retro_etel_1752 80.00 98.73
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10. retro_etel_1839 55.70 97.47
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Download FASTA sequences of all ENSETEG00000001260 retrocopies