Parental gene: | ENSETEG00000009184 |
| Aliases: | None |
| Description: | None |
| Organism: | Lesser hedgehog tenrec (Echinops telfairi) |
| Coordinates: | scaffold_293573:492..8061(+) |
>ENSETEG00000009184
GGAAGAACGGTGATTATTGAGCAGAGTTGGGGAAGTCCTAAAGTAACAAAAGACGGTGTCACAGTTGCAAAATCAATTGA
CTTAAAGGATAAATACAAGAATATTGGGGCCAAACTTGTCCAAGATGTTGCCAATAACACAAATGAAGAGGCCGGCGATG
GTACCACCACGGCCACTGTACTGGCACGCTCAATCGCCAAGGAAGGCTTTGAGAAGATTAGCAAAGGTGCTAATCCAGTG
GAAATCAGAAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAGCTTAAGAAGCAATCTAAACCTGTGACAACACC
TGACGAAATTGCTCAGGTAGCTACAATTTCTGCAAATGGAGACAAAGAAATTGGCACCATCATTTCTGATGCAATGAAAA
AGGTTGGAAGAAAGGGTGTCATCACTGTAAAGGATGGAAAAACATTGAATGATGAATTAGAAATTATTGAAGGAATGAAG
TTTGACCGAGGTTATATTTCTCCATATTTTATTAATACAGCCAAAGGTCAAAAATGCGAGTTCCAGGATGCCTATGTTCT
ATTAAGTGAAAAGAAAATTTCTAGCATTCAGTCCATTGTACCTGCTCAGGAAATTGCCAATGCTCACCGTAAGCCTTTGG
TCATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAAAGTTGGTCTTCAGGTTGTA
GCAGTCAAAGCTCCAGGTTTTGGCGATAATAGAAAGAACCAGCTTAAGGACATGGCGATTGCTACTGGTGGTGCAGTATT
TGGAGAAGAGGGATTGACCTTGAATCTTGAAGACGTTCAGCCTCATGACTTAGGAAAAGTTGGAGAGGTCATTGTGACCA
AAGATGATGCCATGCTCTTGAAAGGAAAAGGTGACAAAGCTCACATTGAAAAGCGTATTCAAGAAATCATTGAGCAGTTG
GACATCACAACTAGTGAATATGAAAAGGAAAAACTGAATGAACGTCTGGCAAAACTTTCAGATGGAGTAGCTGTGCTAAA
GGTTGGTGGGACAAGTGATGTGGAAGTGAATGAGAAGAAAGACAGAGTTACTGATGCCCTCAATGCAACACGAGCTGCTG
TTGAAGAAGGCATTGTTCTTGGAGGTGGCTGTGCTCTGCTTCGGTGCATTCCGGCCCTGAACTCATTAACTCCAGCAAAT
GAAGATCAAAAAATTGGTATTGAGATTATTAAAAGAACACTCAGAATTCCTGCCATGACCATTGCTAAGAATGCCGGTGT
TGAAGGATCATTGATAGTTGAAAAAATCATGCAGAGTTCCTCAGAAGTTGGTTATGATGCTATGATCGGAGAATTTGTGA
ATATGGTAGAAAAAGGAATCATTGATCCAACCAAGGTGGTAAGAACTGCGTTGTTGGACGCTGCTGGAGTGGCCTCTCTG
CTGACCACAGCAGAAGTTGTAGTCACAGAAATTCCTACTACAGAGAAGGACCCTGGCATGGGTGGGATGGGTGGAAATGG
GCGCGGCATGAGAGGCGACATGTCCTAA
GGAAGAACGGTGATTATTGAGCAGAGTTGGGGAAGTCCTAAAGTAACAAAAGACGGTGTCACAGTTGCAAAATCAATTGA
CTTAAAGGATAAATACAAGAATATTGGGGCCAAACTTGTCCAAGATGTTGCCAATAACACAAATGAAGAGGCCGGCGATG
GTACCACCACGGCCACTGTACTGGCACGCTCAATCGCCAAGGAAGGCTTTGAGAAGATTAGCAAAGGTGCTAATCCAGTG
GAAATCAGAAGAGGTGTGATGTTAGCTGTTGATGCTGTAATTGCTGAGCTTAAGAAGCAATCTAAACCTGTGACAACACC
TGACGAAATTGCTCAGGTAGCTACAATTTCTGCAAATGGAGACAAAGAAATTGGCACCATCATTTCTGATGCAATGAAAA
AGGTTGGAAGAAAGGGTGTCATCACTGTAAAGGATGGAAAAACATTGAATGATGAATTAGAAATTATTGAAGGAATGAAG
TTTGACCGAGGTTATATTTCTCCATATTTTATTAATACAGCCAAAGGTCAAAAATGCGAGTTCCAGGATGCCTATGTTCT
ATTAAGTGAAAAGAAAATTTCTAGCATTCAGTCCATTGTACCTGCTCAGGAAATTGCCAATGCTCACCGTAAGCCTTTGG
TCATAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCTAAAAGTTGGTCTTCAGGTTGTA
GCAGTCAAAGCTCCAGGTTTTGGCGATAATAGAAAGAACCAGCTTAAGGACATGGCGATTGCTACTGGTGGTGCAGTATT
TGGAGAAGAGGGATTGACCTTGAATCTTGAAGACGTTCAGCCTCATGACTTAGGAAAAGTTGGAGAGGTCATTGTGACCA
AAGATGATGCCATGCTCTTGAAAGGAAAAGGTGACAAAGCTCACATTGAAAAGCGTATTCAAGAAATCATTGAGCAGTTG
GACATCACAACTAGTGAATATGAAAAGGAAAAACTGAATGAACGTCTGGCAAAACTTTCAGATGGAGTAGCTGTGCTAAA
GGTTGGTGGGACAAGTGATGTGGAAGTGAATGAGAAGAAAGACAGAGTTACTGATGCCCTCAATGCAACACGAGCTGCTG
TTGAAGAAGGCATTGTTCTTGGAGGTGGCTGTGCTCTGCTTCGGTGCATTCCGGCCCTGAACTCATTAACTCCAGCAAAT
GAAGATCAAAAAATTGGTATTGAGATTATTAAAAGAACACTCAGAATTCCTGCCATGACCATTGCTAAGAATGCCGGTGT
TGAAGGATCATTGATAGTTGAAAAAATCATGCAGAGTTCCTCAGAAGTTGGTTATGATGCTATGATCGGAGAATTTGTGA
ATATGGTAGAAAAAGGAATCATTGATCCAACCAAGGTGGTAAGAACTGCGTTGTTGGACGCTGCTGGAGTGGCCTCTCTG
CTGACCACAGCAGAAGTTGTAGTCACAGAAATTCCTACTACAGAGAAGGACCCTGGCATGGGTGGGATGGGTGGAAATGG
GCGCGGCATGAGAGGCGACATGTCCTAA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000013770 | possible_ortholog | 1 retrogene | |
| Bos taurus | ENSBTAG00000012586 | possible_ortholog | 1 retrogene | |
| Canis familiaris | ENSCAFG00000010865 | possible_ortholog | 4 retrogenes | |
| Choloepus hoffmanni | ENSCHOG00000007401 | possible_ortholog | 5 retrogenes | |
| Callithrix jacchus | ENSCJAG00000003990 | possible_ortholog | 6 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000013226 | possible_ortholog | 3 retrogenes | |
| Homo sapiens | ENSG00000144381 | possible_ortholog | 7 retrogenes | |
| Gorilla gorilla | ENSGGOG00000008267 | possible_ortholog | 6 retrogenes | |
| Loxodonta africana | ENSLAFG00000000053 | possible_ortholog | 1 retrogene | |
| Macropus eugenii | ENSMEUG00000011987 | ortholog_one2many | 2 retrogenes | |
| Myotis lucifugus | ENSMLUG00000000871 | possible_ortholog | 4 retrogenes | |
| Macaca mulatta | ENSMMUG00000010489 | possible_ortholog | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000012289 | ortholog_one2many | 3 retrogenes | |
| Mustela putorius furo | ENSMPUG00000007818 | possible_ortholog | 3 retrogenes | |
| Mus musculus | ENSMUSG00000025980 | possible_ortholog | 5 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000006874 | possible_ortholog | 7 retrogenes | |
| Otolemur garnettii | ENSOGAG00000034053 | ortholog_one2many | 5 retrogenes | |
| Pongo abelii | ENSPPYG00000013046 | possible_ortholog | 5 retrogenes | |
| Pteropus vampyrus | ENSPVAG00000008306 | possible_ortholog | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000014525 | possible_ortholog | 9 retrogenes | |
| Ictidomys tridecemlineatus | ENSSTOG00000028470 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000000513 | possible_ortholog | 6 retrogenes | |
| Tursiops truncatus | ENSTTRG00000003417 | possible_ortholog | 3 retrogenes | |
| Xenopus tropicalis | ENSXETG00000007509 | ortholog_one2many | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_etel_426 | 86.26 | 70.29 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_etel_885 | 87.36 | 86.02 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_etel_925 | 58.30 | 51.65 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_etel_1440 | 75.84 | 51.84 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSETEG00000009184 retrocopies