Parental gene: | Rps21, ENSMUSG00000039001 |
| Aliases: | Rps21, 1810049N11Rik, 2410030A14Rik |
| Description: | ribosomal protein S21 [Source:MGI Symbol;Acc:MGI:1913731] |
| Organism: | Mouse (Mus musculus) |
| Coordinates: | 2:180257376..180258445(+) |
>ENSMUSG00000039001
ATGCAGAACGACGCCGGCGAGTTTGTGGACCTGTACGTGCCGCGGAAATGCTCCGCAAGCAACCGCATCATTGCTGCCAA
GGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCGGTTTAATGGCCAGTTTAAAACCTATG
GCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGATTGGCTAAGGCTGATGGAATTGTCTCA
AAGAACTTTTGA
ATGCAGAACGACGCCGGCGAGTTTGTGGACCTGTACGTGCCGCGGAAATGCTCCGCAAGCAACCGCATCATTGCTGCCAA
GGACCACGCGTCCATCCAGATGAACGTGGCCGAGGTTGATAGGACCACAGGCCGGTTTAATGGCCAGTTTAAAACCTATG
GCATCTGCGGGGCCATTCGCAGGATGGGCGAGTCAGATGATTCTATTCTCCGATTGGCTAAGGCTGATGGAATTGTCTCA
AAGAACTTTTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain | 91 .23 RPM |
| SRP007412_cerebellum | 56 .40 RPM |
| SRP007412_heart | 82 .68 RPM |
| SRP007412_kidney | 73 .67 RPM |
| SRP007412_liver | 64 .53 RPM |
| SRP007412_testis | 35 .77 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Ailuropoda melanoleuca | ENSAMEG00000017399 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000020795 | ortholog_one2one | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000012676 | possible_ortholog | 4 retrogenes | |
| Callithrix jacchus | ENSCJAG00000014195 | ortholog_one2many | 5 retrogenes | |
| Homo sapiens | ENSG00000171858 | ortholog_one2one | 6 retrogenes | |
| Gorilla gorilla | ENSGGOG00000023745 | possible_ortholog | 7 retrogenes | |
| Latimeria chalumnae | ENSLACG00000012753 | ortholog_one2many | 1 retrogene | |
| Monodelphis domestica | ENSMODG00000016769 | ortholog_one2one | 1 retrogene | |
| Ornithorhynchus anatinus | ENSOANG00000003361 | ortholog_one2one | 2 retrogenes | |
| Otolemur garnettii | ENSOGAG00000016673 | ortholog_one2one | 12 retrogenes | |
| Pongo abelii | ENSPPYG00000011205 | possible_ortholog | 8 retrogenes | |
| Pan troglodytes | ENSPTRG00000013708 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000006325 | ortholog_one2many | 2 retrogenes | |
| Sus scrofa | ENSSSCG00000021825 | possible_ortholog | 1 retrogene | |
| Ictidomys tridecemlineatus | ENSSTOG00000001029 | possible_ortholog | 5 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_mmus_576 | 94.74 | 68.67 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_mmus_992 | 63.33 | 68.67 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_mmus_1100 | 57.14 | 74.70 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_mmus_1324 | 78.31 | 97.59 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_mmus_1482 | 85.54 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_mmus_1510 | 87.95 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_mmus_1688 | 63.86 | 98.80 | Please wait, loading | Please wait, loading | Please wait, loading |
| 8. | retro_mmus_1837 | 59.26 | 96.39 | Please wait, loading | Please wait, loading | Please wait, loading |
| 9. | retro_mmus_2039 | 74.70 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 10. | retro_mmus_2071 | 66.13 | 73.49 | Please wait, loading | Please wait, loading | Please wait, loading |
| 11. | retro_mmus_2243 | 66.67 | 73.49 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSMUSG00000039001 retrocopies