Parental gene: | G3BP1, ENSOGAG00000001726 |
| Aliases: | None |
| Description: | GTPase activating protein (SH3 domain) binding protein 1 [Source:HGNC Symbol;Acc:30292] |
| Organism: | Bushbaby (Otolemur garnettii) |
| Coordinates: | GL873522.1:24342683..24357446(-) |
>ENSOGAG00000001726
ATGGTGATGGAGAAGCCTAGTCCCCTGCTGGTCGGGCGGGAGTTTGTGAGACAGTATTATACACTGCTGAACCAGGCCCC
AGACATGCTACATAGATTTTATGGAAAGAACTCTTCCTATGTTCATGGGGGATTGGATTCAAATGGAAAGCCAGCAGATG
CAGTCTACGGGCAGAAAGAAATCCATAGGAAAGTGATGTCACAAAACTTTACCAACTGCCACACCAAGATTCGACATGTT
GATGCTCATGCCACTTTGAATGATGGTGTGGTGGTCCAAGTGATGGGGCTTCTCTCTAATAACAACCAGGCTTTGAGGAG
ATTCATGCAGACATTTGTTCTTGCTCCTGAGGGCTCTGTTGCAAATAAGTTCTATGTTCACAATGATATCTTCAGATACC
AAGATGAGGTCTTTGGTGGCTTTGTCACTGAGCCTCAGGAGGAATCTGAAGAAGAAGTAGAGGAACCTGAAGAAAGACAG
CAGACGCCTGAGGTGGTTCCTGATGATTCTGGAACTTTCTATGATCAGACTGTTGTCAGATTTTCCTGTGAAAGTAATGA
CATGGAAGAACATTTAGAGGAGCCAGTTGTTGAACCAGAACCTGATCCTGAACCGGAACCAGAGCAAGAACCTGTATCTG
AAATCCAAGAAGAAAAGTCTGAGCCAGTGTTAGAAGAAACTGCTCCTGAGGATACGCAGAAGAGTTCTTCTCCAGCACCT
GCAGACATATCTCAGACAGTCCAGGAAGACTTGAGGACCTTTTCTTGGGCGTCTGTGACCAGTAAGAACCTTCCACCTAG
TGGAGCTGTTCCGGTTACTGGAATACCACCTCATGTTGTTAAAGTACCAGCTTCTCAGCCTCGTCCAGAGTCTAAGCCTG
AAACTCAGATTCCACCCCAGAGACCTCAAAGGGATCAAAGAGTGCGAGAGCAACGGATAAATATTCCCCCCCAGAGAGGC
CCCAGACCAATTCGTGAGGCTGGTGAGCAAGGCGATGTTGAACCCCGAAGAATTGTGAGACACCCTGACAGTCACCAACT
CTTCATTGGCAATCTGCCTCATGAGGTGGACAAATCAGAGCTTAAAGATTTCTTTCAAAATTATGGGAATGTAGTGGAGC
TGCGCATCAACAGTGGTGGGAAATTACCCAATTTTGGTTTTGTTGTGTTTGATGATTCTGAGCCTGTTCAGAAGGTCCTT
AGCAACAGGCCCATCATGTTCAGAGGTGAAGTCCGCTTGAATGTGGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGGGA
CCGTCGAGATAACCGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGGTGGAATGAGAGGCCCTCCCCGTGGAG
GCATGGTGCAGAAACCAGGATTTGGAGTGGGAAGGGGGATTGCTCCAAGGCAGTGA
ATGGTGATGGAGAAGCCTAGTCCCCTGCTGGTCGGGCGGGAGTTTGTGAGACAGTATTATACACTGCTGAACCAGGCCCC
AGACATGCTACATAGATTTTATGGAAAGAACTCTTCCTATGTTCATGGGGGATTGGATTCAAATGGAAAGCCAGCAGATG
CAGTCTACGGGCAGAAAGAAATCCATAGGAAAGTGATGTCACAAAACTTTACCAACTGCCACACCAAGATTCGACATGTT
GATGCTCATGCCACTTTGAATGATGGTGTGGTGGTCCAAGTGATGGGGCTTCTCTCTAATAACAACCAGGCTTTGAGGAG
ATTCATGCAGACATTTGTTCTTGCTCCTGAGGGCTCTGTTGCAAATAAGTTCTATGTTCACAATGATATCTTCAGATACC
AAGATGAGGTCTTTGGTGGCTTTGTCACTGAGCCTCAGGAGGAATCTGAAGAAGAAGTAGAGGAACCTGAAGAAAGACAG
CAGACGCCTGAGGTGGTTCCTGATGATTCTGGAACTTTCTATGATCAGACTGTTGTCAGATTTTCCTGTGAAAGTAATGA
CATGGAAGAACATTTAGAGGAGCCAGTTGTTGAACCAGAACCTGATCCTGAACCGGAACCAGAGCAAGAACCTGTATCTG
AAATCCAAGAAGAAAAGTCTGAGCCAGTGTTAGAAGAAACTGCTCCTGAGGATACGCAGAAGAGTTCTTCTCCAGCACCT
GCAGACATATCTCAGACAGTCCAGGAAGACTTGAGGACCTTTTCTTGGGCGTCTGTGACCAGTAAGAACCTTCCACCTAG
TGGAGCTGTTCCGGTTACTGGAATACCACCTCATGTTGTTAAAGTACCAGCTTCTCAGCCTCGTCCAGAGTCTAAGCCTG
AAACTCAGATTCCACCCCAGAGACCTCAAAGGGATCAAAGAGTGCGAGAGCAACGGATAAATATTCCCCCCCAGAGAGGC
CCCAGACCAATTCGTGAGGCTGGTGAGCAAGGCGATGTTGAACCCCGAAGAATTGTGAGACACCCTGACAGTCACCAACT
CTTCATTGGCAATCTGCCTCATGAGGTGGACAAATCAGAGCTTAAAGATTTCTTTCAAAATTATGGGAATGTAGTGGAGC
TGCGCATCAACAGTGGTGGGAAATTACCCAATTTTGGTTTTGTTGTGTTTGATGATTCTGAGCCTGTTCAGAAGGTCCTT
AGCAACAGGCCCATCATGTTCAGAGGTGAAGTCCGCTTGAATGTGGAAGAGAAGAAGACTCGAGCTGCCAGGGAAGGGGA
CCGTCGAGATAACCGCCTTCGGGGACCTGGAGGCCCTCGAGGTGGGCTGGGTGGTGGAATGAGAGGCCCTCCCCGTGGAG
GCATGGTGCAGAAACCAGGATTTGGAGTGGGAAGGGGGATTGCTCCAAGGCAGTGA
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Cavia porcellus | ENSCPOG00000006626 | possible_ortholog | 2 retrogenes | |
| Dasypus novemcinctus | ENSDNOG00000018758 | ortholog_one2one | 3 retrogenes | |
| Homo sapiens | ENSG00000145907 | ortholog_one2one | 1 retrogene | |
| Microcebus murinus | ENSMICG00000012235 | ortholog_one2one | 2 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013661 | ortholog_one2one | 1 retrogene | |
| Mus musculus | ENSMUSG00000018583 | possible_ortholog | 3 retrogenes | |
| Nomascus leucogenys | ENSNLEG00000016470 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000022143 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000157 | within_species_paralog | 1 retrogene | |
| Pongo abelii | ENSPPYG00000015968 | ortholog_one2one | 1 retrogene | |
| Pan troglodytes | ENSPTRG00000017438 | ortholog_one2one | 1 retrogene | |
| Pteropus vampyrus | ENSPVAG00000017250 | ortholog_one2one | 2 retrogenes | |
| Rattus norvegicus | ENSRNOG00000013186 | possible_ortholog | 1 retrogene | |
| Tarsius syrichta | ENSTSYG00000004570 | ortholog_one2one | 1 retrogene |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_ogar_3156 | 82.75 | 84.71 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_ogar_3183 | 83.53 | 88.75 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSOGAG00000001726 retrocopies