Parental gene: | RPS14, ENSPPYG00000015950 |
| Aliases: | None |
| Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
| Organism: | Orangutan (Pongo abelii) |
| Coordinates: | 5:152414042..152420873(-) |
>ENSPPYG00000015950
ATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGTGGCTGAAGGAGAGAATGT
ATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCTTTCTGGCAAAGAAACCATCT
GCCGTGTGACTGGTGGGATGAAGGTGAAGGCAGACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGAC
CCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGAATTGAGGATGTCACCC
CCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA
ATGGCACCTCGAAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTCGGACCTCAGGTGGCTGAAGGAGAGAATGT
ATTTGGTGTCTGCCATATCTTTGCATCCTTCAATGACACTTTTGTCCATGTCACTGATCTTTCTGGCAAAGAAACCATCT
GCCGTGTGACTGGTGGGATGAAGGTGAAGGCAGACCGAGATGAATCCTCACCATATGCTGCTATGTTGGCTGCCCAGGAT
GTGGCCCAGAGGTGCAAGGAGCTGGGTATCACCGCCCTACACATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGAC
CCCTGGACCTGGGGCCCAGTCGGCCCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGAATTGAGGATGTCACCC
CCATCCCCTCTGACAGCACTCGCAGGAAGGGGGGTCGCCGTGGTCGCCGTCTGTGA
| Library | Parental gene expression (RPM) |
|---|---|
| SRP007412_brain_prefrontal_cortex | 184 .89 RPM |
| SRP007412_cerebellum | 112 .24 RPM |
| SRP007412_heart | 182 .79 RPM |
| SRP007412_kidney | 315 .29 RPM |
| SRP007412_liver | 293 .96 RPM |
| Species | Parental gene accession | Homology type | Retrogenes number | |
|---|---|---|---|---|
| Anolis carolinensis | ENSACAG00000015004 | ortholog_one2one | 1 retrogene | |
| Ailuropoda melanoleuca | ENSAMEG00000004644 | possible_ortholog | 2 retrogenes | |
| Bos taurus | ENSBTAG00000008570 | possible_ortholog | 2 retrogenes | |
| Canis familiaris | ENSCAFG00000018094 | possible_ortholog | 2 retrogenes | |
| Callithrix jacchus | ENSCJAG00000020981 | possible_ortholog | 1 retrogene | |
| Cavia porcellus | ENSCPOG00000024408 | possible_ortholog | 2 retrogenes | |
| Echinops telfairi | ENSETEG00000002899 | ortholog_one2one | 6 retrogenes | |
| Homo sapiens | ENSG00000164587 | ortholog_one2one | 8 retrogenes | |
| Gorilla gorilla | ENSGGOG00000024593 | ortholog_one2one | 8 retrogenes | |
| Latimeria chalumnae | ENSLACG00000016164 | possible_ortholog | 1 retrogene | |
| Macaca mulatta | ENSMMUG00000002848 | possible_ortholog | 5 retrogenes | |
| Mustela putorius furo | ENSMPUG00000013776 | possible_ortholog | 1 retrogene | |
| Nomascus leucogenys | ENSNLEG00000010366 | possible_ortholog | 1 retrogene | |
| Oryctolagus cuniculus | ENSOCUG00000011509 | possible_ortholog | 1 retrogene | |
| Otolemur garnettii | ENSOGAG00000000721 | ortholog_one2many | 1 retrogene | |
| Rattus norvegicus | ENSRNOG00000018774 | possible_ortholog | 10 retrogenes | |
| Sarcophilus harrisii | ENSSHAG00000018052 | ortholog_one2one | 3 retrogenes | |
| Tupaia belangeri | ENSTBEG00000006368 | ortholog_one2one | 10 retrogenes |
| # | RetrogeneDB ID | Identity (%) | Coverage (%) | ORF conservation | Expression evidence | RDV |
|---|---|---|---|---|---|---|
| 1. | retro_pabe_401 | 82.96 | 87.42 | Please wait, loading  | Please wait, loading | Please wait, loading |
| 2. | retro_pabe_494 | 89.47 | 100.00 | Please wait, loading | Please wait, loading | Please wait, loading |
| 3. | retro_pabe_1340 | 74.34 | 73.51 | Please wait, loading | Please wait, loading | Please wait, loading |
| 4. | retro_pabe_2487 | 57.94 | 82.12 | Please wait, loading | Please wait, loading | Please wait, loading |
| 5. | retro_pabe_2571 | 75.69 | 92.05 | Please wait, loading | Please wait, loading | Please wait, loading |
| 6. | retro_pabe_2888 | 68.00 | 82.78 | Please wait, loading | Please wait, loading | Please wait, loading |
| 7. | retro_pabe_3204 | 70.18 | 74.83 | Please wait, loading | Please wait, loading | Please wait, loading |
Download FASTA sequences of all ENSPPYG00000015950 retrocopies