RetrogeneDB ID: | retro_etel_1995 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_322424:187334..187780(+) | ||
Located in intron of: | ENSETEG00000010328 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSETEG00000002899 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 79.74 % |
Parental protein coverage: | 99.34 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 1 |
Parental | MAPRKGKEKKEEQV--ISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDE |
MAP.KGK.KKEEQV....LGPQVAEGENVFGVCHI.ASFNDTFVHV.DLSGKET.C.V.GGMKVKAD.DE | |
Retrocopy | MAPHKGKGKKEEQVGHQPLGPQVAEGENVFGVCHICASFNDTFVHVIDLSGKETVCPVMGGMKVKADGDE |
Parental | SSPYAAMLAAQDVAQRCKELGITALHIKLRATGGNRTKTPGPGAQSALRA-LARSGMKIGRIEDVTPIPS |
SS..A..LAAQDVAQRC.ELG...LHIKLRATG..RTKTPGPGAQS.L.A.LARSGMKI...EDVTPI.S | |
Retrocopy | SSFHATLLAAQDVAQRCQELGLPTLHIKLRATGSHRTKTPGPGAQSVL*A<LARSGMKI---EDVTPILS |
Parental | DSTRRKGGRRGRR |
DS..RKGGRRGRR | |
Retrocopy | DSSGRKGGRRGRR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |