RetrogeneDB ID: | retro_etel_293 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | GeneScaffold_4857:189944..190396(-) | ||
Located in intron of: | ENSETEG00000019606 | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSETEG00000002899 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 84.87 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 1 |
Parental | MAPRKGKEKKEEQVISLGPQVAEGENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKVKADRDESS |
MAP.KGK.KKEEQ.ISL.PQVAEGE..FGVC.IFASFNDTFVHVTDLS.KETICR.TGGMKVKADRDES. | |
Retrocopy | MAPGKGKGKKEEQDISLRPQVAEGETIFGVCCIFASFNDTFVHVTDLSDKETICRATGGMKVKADRDESW |
Parental | PYAAMLAAQDVAQRCKELGIT-ALHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDS |
PYA.MLAAQDV.QRCKEL.IT.ALHI.LRATGGNRT.TPGPGAQS.L..LA.SGMKIG.IEDVTPIPSDS | |
Retrocopy | PYATMLAAQDVDQRCKELVIT<ALHIELRATGGNRTETPGPGAQSVLQSLAGSGMKIGQIEDVTPIPSDS |
Parental | TRRKGGRRGRRL |
TRRKGGR.GR.L | |
Retrocopy | TRRKGGRHGRWL |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |