Parental gene:

RPS14, ENSSHAG00000018052

Aliases:None
Description:ribosomal protein S14 [Source:HGNC Symbol;Acc:10387]
Organism:Tasmanian devil (Sarcophilus harrisii)
Coordinates:GL834603.1:3215082..3221481(-)


>ENSSHAG00000018052
TGGAAGTACAAAACAAAAATGGCACCTCGCAAGGGGAAGGAAAAGAAGGAAGAACAGGTCATCAGCCTTGGACCTCAGGT
TGCAGAGGGAGAGAATGTGTTTGGGGTCTGCCACATCTTTGCTTCCTTCAATGACACCTTTGTTCATGTCACTGATCTCT
CTGGCAAAGAAACCATCTGCAGAGTGACTGGTGGGATGAAGGTCAAGGCTGACAGAGACGAGTCTTCTCCCTATGCTGCC
ATGCTGGCTGCTCAGGACGTTGCTCAGAGGTGTAAAGAACTGGGCATCACTGCCCTTCACATCAAACTTCGGGCCACAGG
GGGAAACAGGACTAAGACACCTGGCCCTGGCGCACAGTCAGCCCTGAGGGCCCTGGCACGTTCTGGAATGAAGATCGGGC
GGATTGAGGATGTCACTCCAATCCCCTCTGACAGTACTCGCAGAAAGGGTGGTCGCCGTGGTCGCCGTCTGTGA

Species Parental gene accession Homology type Retrogenes number
Anolis carolinensis ENSACAG00000015004 ortholog_one2one 1 retrogene
retro_acar_201,
Ailuropoda melanoleuca ENSAMEG00000004644 possible_ortholog 2 retrogenes
retro_amel_1390, retro_amel_524,
Bos taurus ENSBTAG00000008570 possible_ortholog 2 retrogenes
retro_btau_1109, retro_btau_213,
Canis familiaris ENSCAFG00000018094 possible_ortholog 2 retrogenes
retro_cfam_1589, retro_cfam_301,
Callithrix jacchus ENSCJAG00000020981 possible_ortholog 1 retrogene
retro_cjac_89,
Cavia porcellus ENSCPOG00000024408 possible_ortholog 2 retrogenes
retro_cpor_253, retro_cpor_284,
Echinops telfairi ENSETEG00000002899 ortholog_one2one 6 retrogenes
retro_etel_1270, retro_etel_1358, retro_etel_1851, retro_etel_1995, retro_etel_293, retro_etel_967,
Homo sapiens ENSG00000164587 ortholog_one2one 8 retrogenes
retro_hsap_119, retro_hsap_1622, retro_hsap_268, retro_hsap_3001, retro_hsap_3113, retro_hsap_3232, retro_hsap_3495, retro_hsap_3789,
Gorilla gorilla ENSGGOG00000024593 ortholog_one2one 8 retrogenes
retro_ggor_1225, retro_ggor_2080, retro_ggor_2135, retro_ggor_2199, retro_ggor_222, retro_ggor_2362, retro_ggor_2548, retro_ggor_316,
Latimeria chalumnae ENSLACG00000016164 possible_ortholog 1 retrogene
retro_lcha_12,
Macaca mulatta ENSMMUG00000002848 possible_ortholog 5 retrogenes
retro_mmul_1921, retro_mmul_1983, retro_mmul_358, retro_mmul_570, retro_mmul_90,
Mustela putorius furo ENSMPUG00000013776 possible_ortholog 1 retrogene
retro_mputfur_127,
Nomascus leucogenys ENSNLEG00000010366 possible_ortholog 1 retrogene
retro_nleu_101,
Oryctolagus cuniculus ENSOCUG00000011509 possible_ortholog 1 retrogene
retro_ocun_128,
Otolemur garnettii ENSOGAG00000000721 ortholog_one2many 1 retrogene
retro_ogar_286,
Pongo abelii ENSPPYG00000015950 ortholog_one2one 7 retrogenes
retro_pabe_1340, retro_pabe_2487, retro_pabe_2571, retro_pabe_2888, retro_pabe_3204, retro_pabe_401, retro_pabe_494,
Rattus norvegicus ENSRNOG00000018774 possible_ortholog 10 retrogenes
retro_rnor_1313, retro_rnor_1467, retro_rnor_1532, retro_rnor_1759, retro_rnor_1875, retro_rnor_1918, retro_rnor_2181, retro_rnor_228, retro_rnor_2728, retro_rnor_873,
Tupaia belangeri ENSTBEG00000006368 ortholog_one2one 10 retrogenes
retro_tbel_1147, retro_tbel_1332, retro_tbel_1603, retro_tbel_1868, retro_tbel_202, retro_tbel_3517, retro_tbel_3619, retro_tbel_416, retro_tbel_519, retro_tbel_740,

# RetrogeneDB ID Identity (%) Coverage (%) ORF conservation Expression evidence RDV
1. retro_shar_380 70.83 75.80
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2. retro_shar_381 72.13 75.80
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3. retro_shar_503 61.16 75.80
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Download FASTA sequences of all ENSSHAG00000018052 retrocopies