RetrogeneDB ID: | retro_etel_1851 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_307975:77717..78093(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | RPS14 | ||
Ensembl ID: | ENSETEG00000002899 | ||
Aliases: | None | ||
Description: | ribosomal protein S14 [Source:HGNC Symbol;Acc:10387] |
Percent Identity: | 58.14 % |
Parental protein coverage: | 84.11 % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 2 |
Parental | ENVFGVCHIFASFNDTFVHVTDLSGKETICRVTGGMKV-KADRDESSPYAAMLAAQDVAQRCKEL-GITA |
....GVCHIFASF..TFVHVTDL........VT...KV..AD..ES.PY..MLAAQDVAQR.KEL.GIT. | |
Retrocopy | QGMSGVCHIFASFSYTFVHVTDL-WQGSHLHVTDRVKV<DAD*AES*PYISMLAAQDVAQRYKEL<GITV |
Parental | LHIKLRATGGNRTKTPGPGAQSALRALARSGMKIGRIEDVTPIPSDSTRRKGGRRGRRL |
LHI.L..TGGN.TKT..PGAQSAL.ALA..G.K.G.IEDV.P.P.......G.....R. | |
Retrocopy | LHITL*TTGGNWTKTLDPGAQSAL*ALACLGIKSGQIEDVIPSPEHLMEELGSPAVNRI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |