RetrogeneDB ID: | retro_dord_18 | ||
Retrocopylocation | Organism: | Kangaroo rat (Dipodomys ordii) | |
Coordinates: | scaffold_17299:14690..15281(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | ENSDORG00000016173 | |
Aliases: | None | ||
Status: | KNOWN_PROTEIN_CODING | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | None | ||
Ensembl ID: | ENSDORG00000003382 | ||
Aliases: | None | ||
Description: | None |
Percent Identity: | 84.82 % |
Parental protein coverage: | 98.96 % |
Number of stop codons detected: | 0 |
Number of frameshifts detected | 0 |
Parental | MAAIRKKLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLR |
MAAIRKKLV.VGDGACGKTCLLIVFSKD.FPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLR | |
Retrocopy | MAAIRKKLVVVGDGACGKTCLLIVFSKDEFPEVYVPTVFENYVADIEVDGKQVELALWDTAGQEDYDRLR |
Parental | PLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVKHFCPNVPIILVGNKKDLRNDEHTRRELAKMKQEPVK |
PLSYPDTDVILMCFS.DSPDSLENIPEKW.PEVKHFCPNVPIILV.NKKDLR.DEH.R.ELA.MKQEPV. | |
Retrocopy | PLSYPDTDVILMCFSVDSPDSLENIPEKWVPEVKHFCPNVPIILVANKKDLRSDEHVRTELARMKQEPVR |
Parental | PEEGRDMANRIGAFGYMECSAKTKDGVREVFE-MTRAALQARRGKKKSGCL |
...GR.MA.RI.A..Y.ECSAKTK.GVREVFE..TRAALQ.R.G....GC. | |
Retrocopy | TDDGRAMAVRIQAYDYLECSAKTKEGVREVFETATRAALQKRYG-SQNGCI |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |