RetrogeneDB ID: | retro_etel_1179 | ||
Retrocopylocation | Organism: | Lesser hedgehog tenrec (Echinops telfairi) | |
Coordinates: | scaffold_223759:441..765(+) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17A | ||
Ensembl ID: | ENSETEG00000006334 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] |
Percent Identity: | 88.89 % |
Parental protein coverage: | 62.43 % |
Number of stop codons detected: | 1 |
Number of frameshifts detected | 0 |
Parental | IEEKRYAREPGPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAV |
.....YA.EP.PW.IV.DCGGAFTMGTIGGGIFQAIKGF.NSPVGVNHRLRGSLTAIKTRAPQLGGSFAV | |
Retrocopy | VKMEEYA*EPCPWCIVEDCGGAFTMGTIGGGIFQAIKGFWNSPVGVNHRLRGSLTAIKTRAPQLGGSFAV |
Parental | WGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAAR |
WGGLFSMIDCSMVQVRGKEDPWNSITSG.LTGAIL.AR | |
Retrocopy | WGGLFSMIDCSMVQVRGKEDPWNSITSGVLTGAILVAR |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |