RetrogeneDB ID: | retro_chof_1693 | ||
Retrocopylocation | Organism: | Sloth (Choloepus hoffmanni) | |
Coordinates: | scaffold_35944:497..1016(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17A | ||
Ensembl ID: | ENSCHOG00000007440 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] |
Percent Identity: | 74.57 % |
Parental protein coverage: | 100. % |
Number of stop codons detected: | 4 |
Number of frameshifts detected | 0 |
Parental | MEEYAREP--CPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPMGVNHRLRGSLTAIKTRAPQLGGSFAV |
MEEY..EP...PW..V.DCGG.FTMGT.GGGIFQAIKGF.NS...VN.RL.GSLTAIKTRAPQLGGSF.V | |
Retrocopy | MEEYVQEPGSYPW*MVEDCGGVFTMGTLGGGIFQAIKGFHNSSVRVNQRL*GSLTAIKTRAPQLGGSFVV |
Parental | WGGLFSMIDCSMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFAS |
WGGLF...D..MVQVRGKED.WNSI.S..L.GA.LAARNGPVAMVGSA...G.LLALIEGAGILLTR.AS | |
Retrocopy | WGGLFFIMDSNMVQVRGKEDAWNSIRSDVLKGAVLAARNGPVAMVGSAVTVGFLLALIEGAGILLTRLAS |
Parental | TQFPNGPQFAEDPSQLPSTQLPSSPFGDYRQYQ |
...P.GP.FAED.SQL.STQLPSS.FGD..Q.Q | |
Retrocopy | V*VPSGPWFAEDSSQLLSTQLPSSLFGDNGQ*Q |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |