RetrogeneDB ID: | retro_tsyr_1512 | ||
Retrocopylocation | Organism: | Tarsier (Tarsius syrichta) | |
Coordinates: | scaffold_47349:4943..5443(-) | ||
Located in intron of: | None | ||
Retrocopyinformation | Ensembl ID: | None | |
Aliases: | None | ||
Status: | NOVEL | ||
Parental geneinformation | Parental gene summary: | ||
Parental gene symbol: | TIMM17A | ||
Ensembl ID: | ENSTSYG00000011606 | ||
Aliases: | None | ||
Description: | translocase of inner mitochondrial membrane 17 homolog A (yeast) [Source:HGNC Symbol;Acc:17315] |
Percent Identity: | 88.69 % |
Parental protein coverage: | 97.08 % |
Number of stop codons detected: | 3 |
Number of frameshifts detected | 1 |
Parental | REPCPWRIVDDCGGAFTMGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSM |
REPC.W.IV.DCG.AFTMGTIGGGIFQA.KGF.NSP.GVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSM | |
Retrocopy | REPCLW*IVNDCGRAFTMGTIGGGIFQAMKGF*NSPIGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSM |
Parental | IDC-SMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILLALIEGAGILLTRFASAQFLNG |
I.C..MVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGS.AMGGILLALI..A.ILLTRFASAQF..G | |
Retrocopy | INC<QMVQVRGKEDPWNSITSGALTGAILAARNGPVAMVGSVAMGGILLALID*ACILLTRFASAQFPSG |
Parental | PQFAEDPSQLPSTQ-LPSSPFGDYRQYQ |
PQFAED.SQLP.TQ.LPSSPFGDYRQYQ | |
Retrocopy | PQFAEDSSQLPPTQLLPSSPFGDYRQYQ |
* | Stop codon |
> | Forward frameshift by one nucleotide |
< | Reverse frameshift by one nucleotide |